Difference between revisions of "IGT:ToolKit/Neurosurgical-Planning"

From NAMIC Wiki
Jump to: navigation, search
Line 1: Line 1:
Neurosurgical Planning for Image Guided Therapy using Slicer3
+
[[Image:NeurosurgicalPlanningOverview.png|300px|thumb]]
  
[[Media:PatientDataset.tgz | Patient dataset]]
+
Back to [[IGT:ToolKit|IGT:ToolKit]]
  
;[http://www.na-mic.org/pages/Special:PubDB_View?dspaceid=1265 SPL-PNL Brain Atlas] (download the .zip file)
+
=Neurosurgical Planning for Image Guided Therapy using Slicer3=
  
[[Media:AnatomicalMRIRegisteredToAtlas.mrml | MRML scene registering the patient with the atlas]]
+
==Overview==
  
[[Media:AnatomicalMRIRegisteredToDTI.mrml | MRML scene registering the patient's anatomical MRI with the patien's DTI]]
+
This tutorial reviews Slicer3's Image Guided Therapy capabilities using the example of preoperative planning for neurosurgery.  It covers how to perform multiple tasks in Slicer3, including:
 +
* Image registration
 +
* Segmentation and model making
 +
* Diffusion Tensor Imaging and tractography
 +
* Using an atlas
  
[[Media:ImageGuidedTherapyPlanning.pdf | Tutorial slides]]
+
==Tutorial Materials==
 +
* [[Media:ImageGuidedTherapyPlanning.pdf|Tutorial slides]] for the Neurosurgical Planning Tutorial
 +
* [[Media:PatientDataset.tgz | Patient dataset]]
 +
* SPL-PNL brain atlas - download the .zip file from [http://www.na-mic.org/pages/Special:PubDB_View?dspaceid=1265 here]
 +
* [[Media:AnatomicalMRIRegisteredToAtlas.mrml | MRML scene registering the patient with the atlas]] (right-click to save)
 +
* [[Media:AnatomicalMRIRegisteredToDTI.mrml | MRML scene registering the patient's anatomical MRI with the patient's DTI]] (right-click to save)
 +
 
 +
==Software Installation Instructions==
 +
Go to the [http://wiki.na-mic.org/Wiki/index.php/IGT:ToolKit/Install-Slicer3 Slicer3 Install] site.
 +
 
 +
==People==
 +
* [http://www.spl.harvard.edu/pages/People/dpace Danielle Pace]
 +
* [http://www.spl.harvard.edu/pages/People/noby Nobuhiko Hata]

Revision as of 04:05, 5 June 2008

Home < IGT:ToolKit < Neurosurgical-Planning
NeurosurgicalPlanningOverview.png

Back to IGT:ToolKit

Neurosurgical Planning for Image Guided Therapy using Slicer3

Overview

This tutorial reviews Slicer3's Image Guided Therapy capabilities using the example of preoperative planning for neurosurgery. It covers how to perform multiple tasks in Slicer3, including:

  • Image registration
  • Segmentation and model making
  • Diffusion Tensor Imaging and tractography
  • Using an atlas

Tutorial Materials

Software Installation Instructions

Go to the Slicer3 Install site.

People