Difference between revisions of "2009 Summer Project Week Liver Ablation Slicer"
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Image:PW2009-v3.png|[[2009_Summer_Project_Week|Project Week Main Page]] | Image:PW2009-v3.png|[[2009_Summer_Project_Week|Project Week Main Page]] | ||
Image:originalSegmentation.png|Segmentation showing no pass zones (ribs)and tumor. | Image:originalSegmentation.png|Segmentation showing no pass zones (ribs)and tumor. | ||
| + | Image:segmentationAfterDilation.png|Segmented tumor region is dilated according to physician prescribed ablation margin. | ||
</gallery> | </gallery> | ||
Revision as of 16:39, 11 June 2009
Home < 2009 Summer Project Week Liver Ablation Slicer
Segmentation showing no pass zones (ribs)and tumor.
Segmented tumor region is dilated according to physician prescribed ablation margin.
Key Investigators
- BWH: Haiying Liu, Noby Hata
- Georgetown: Ziv Yaniv
Objective
Implement a complete workflow:
- Load data.
- Manually mark regions (tumor, entry, critical structure).
- Process segmentation and export information to planning module (executable plugin with command line options).
- Load results of the optimization program.
- Configure OpenIGTLink module on Slicer and run OpenIGTLink IGSTK client.
- Navigate.
Approach, Plan
- Integrate code from Georgetown for step 3 into Slicer.
- Decide on appropriate format for describing the output of the optimization (set of trajectories and ablations along each trajectory).
- Implement a stub executable plugin as a stand in for the optimization program.
- Test the integrated workflow.
Progress
A new module is being created in Slicer3.
