Projects:ARRA:SlicerEM:Developer

Back to SlicerEM page

Kitware Team

• Sebastien Barre - Workflow manager - 50%
• Julien Finet - Chart/Plot export - work in // with vtkChart folks - 10%
• Jean-Christophe Fillion-Robin (Project Lead) - Infrastructure / Python - 50%
• Danielle Pace - Workflow manager - 100%

Unassigned Items

lists tasks that need to be done

• Mile stones for project at next weeks meeting
• Review which widgets should be converted

Work in Progress

What do you plan to do this week

Jc

• Create initial directory structure
• Write down Developer page

Team meeting

lists the team meeting and includes a pointer to the associated notes

• 7/8/2010 - Kickoff meeting

Development environment

Contributing to CTK

• Each developer should fork CTK official repository (github.com/commontk/CTK). Doing so will allow to:
  • backup its work before integration with CTK master.
  • publish and share its work

• Refer to the follow document: http://www.commontk.org/index.php/Contributing_to_CTK.

• All contribution related to EMSegmenter should be integrated to next branch.

Working on Slicer / CTK in parallel

• Step1: Build slicer following these instruction. Enable both Slicer3_USE_KWWIDGETS and Slicer3_USE_QT.
• Step2: Create a github user [1] and fork CTK (http://github.com/commontk/CTK).
• Step3: Build CTK - See these instructions - We will teach CTK to use the VTK build by Slicer
  • Make sure you set the following options
    • PluginFramework should be disable: CTK_LIB_PluginFramework:BOOL=OFF and CTK_PLUGIN_org.commontk.eventbus:BOOL=OFF
    • Enable VTK: CTK_LIB_Visualization/VTK/Widgets:BOOL=ON, VTK_DIR:PATH=<SlicerVTK_Binary_DIR>

cd MyProjects
git clone http://github.com/me/CTK
mkdir CTK-Superbuild
cd CTK-Superbuild
ccmake -DCTK_LIB_PluginFramework:BOOL=OFF -DCTK_PLUGIN_org.commontk.eventbus:BOOL=OFF -DCTK_LIB_Visualization/VTK/Widgets:BOOL=ON -DVTK_DIR:PATH=/home/me/MyProjects/Slicer3-SuperBuild/VTK-build ../CTK
make

• Step4: Re-configure slicer4 passing CTK_DIR

cd MyProjects/Slicer3-Superbuild
ccmake -DCTK_DIR:PATH=/home/me/MyProjects/CTK-Superbuild .

EMSegment source code

• The name of the Qt module is EMSegment.
• The associated source code, hosted on slicer3 repository (trunk) is located in the following directory: <SRC>/QTModules/EMSegment
• Every commit related to EMSegment should be prefixed with either:
  • ENH: EMSegment - <Message summary>
  • COMP: EMSegment - <Message summary>
  • BUG: EMSegment - <Message summary>
  • STYLE: EMSegment - <Message summary>