Difference between revisions of "Projects:ARRA:SlicerWF:PediatricMSSegmentation"
From NAMIC Wiki
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== ICBM Atlases == | == ICBM Atlases == | ||
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[[File:SlicerWF_Ped_Icbm152_sym_t1w.nii.zip]] | [[File:SlicerWF_Ped_Icbm152_sym_t1w.nii.zip]] | ||
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[[File:SlicerWF_Ped_Icbm152_sym_wm.nii.zip]] | [[File:SlicerWF_Ped_Icbm152_sym_wm.nii.zip]] | ||
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+ | * NOTE: skull and air were obtained from T1 atlas by masking with Slicer3 | ||
[[File:SlicerWF_Ped_Icbm152_skull.nii.zip]] | [[File:SlicerWF_Ped_Icbm152_skull.nii.zip]] | ||
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[[File:SlicerWF_Ped_Icbm152_air.nii.zip]] | [[File:SlicerWF_Ped_Icbm152_air.nii.zip]] | ||
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+ | * Histogram matched atlases (to T1 template - recommended for usage) | ||
[[File:SlicerWF_Ped_Icbm152_sym_csf_hm.nii.zip]] | [[File:SlicerWF_Ped_Icbm152_sym_csf_hm.nii.zip]] | ||
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[[File:SlicerWF_Ped_Icbm152_sym_wm_hm.nii.zip]] | [[File:SlicerWF_Ped_Icbm152_sym_wm_hm.nii.zip]] | ||
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Latest revision as of 22:24, 4 February 2011
Home < Projects:ARRA:SlicerWF:PediatricMSSegmentationObjective
To embed Slicer3/4 EM Segmenter module for Pediatric cases processing:
1. Human Brain
2. Full Parcellation
ICBM Atlases
File:SlicerWF Ped Icbm152 sym t1w.nii.zip
File:SlicerWF Ped Icbm152 sym mask.nii.zip
File:SlicerWF Ped Icbm152 sym csf.nii.zip
File:SlicerWF Ped Icbm152 sym gm.nii.zip
File:SlicerWF Ped Icbm152 sym wm.nii.zip
- NOTE: skull and air were obtained from T1 atlas by masking with Slicer3
File:SlicerWF Ped Icbm152 skull.nii.zip
File:SlicerWF Ped Icbm152 air.nii.zip
- Histogram matched atlases (to T1 template - recommended for usage)
File:SlicerWF Ped Icbm152 sym csf hm.nii.zip
File:SlicerWF Ped Icbm152 sym gm hm.nii.zip
File:SlicerWF Ped Icbm152 sym wm hm.nii.zip