Difference between revisions of "Projects:ARRA:SlicerEM:AtlasCreator:Tests"

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* Toolkit: BRAINSFit
 
* Toolkit: BRAINSFit
 
* Registration Type: Affine
 
* Registration Type: Affine
−
* Runtime: 1244 minutes
+
* Runtime: 1244 minutes (< 24h)
  
 
* Log: [[File:07brainsfitDynamic.txt]]
 
* Log: [[File:07brainsfitDynamic.txt]]
Line 226: Line 226:
 
Image:07atlas32.png|Atlas for label 32 output
 
Image:07atlas32.png|Atlas for label 32 output
 
Image:07exampleBeforeAndAfter.png|Checkerboard: Before-Template and After-Template
 
Image:07exampleBeforeAndAfter.png|Checkerboard: Before-Template and After-Template
 +
</gallery>
 +
 +
=== 08: Dynamic with CMTK on 50 Cases ===
 +
* Machine: b2-t74-1
 +
** CPU: 4x Xeon 3 GHz
 +
** RAM: 32 GB
 +
** OS: Linux 64
 +
** AtlasCreator Version: 0.21
 +
 +
* No. of Cases: 50
 +
* Template Type: Dynamic
 +
* Iterations: 5
 +
* Toolkit: CMTK
 +
* Registration Type: Affine
 +
* Runtime: 3099 minutes (>48 h)
 +
 +
* Log: [[File:08cmtkDynamic.txt]]
 +
* MRML Scene: [[File:08cmtkDynamic.zip]]
 +
 +
<gallery>
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Image:08template.png|Dynamic Template
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Image:08atlas.png|Combined Atlas output
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Image:08atlas3.png|Atlas for label 3 output
 +
Image:08atlas4.png|Atlas for label 4 output
 +
Image:08atlas5.png|Atlas for label 5 output
 +
Image:08atlas6.png|Atlas for label 6 output
 +
Image:08atlas7.png|Atlas for label 7 output
 +
Image:08atlas8.png|Atlas for label 8 output
 +
Image:08atlas9.png|Atlas for label 9 output
 +
Image:08atlas10.png|Atlas for label 10 output
 +
Image:08atlas31.png|Atlas for label 31 output
 +
Image:08atlas32.png|Atlas for label 32 output
 +
Image:08exampleBeforeAndAfter.png|Checkerboard: Before-Template and After-Template
 
</gallery>
 
</gallery>

Revision as of 17:10, 7 March 2011

Home < Projects:ARRA:SlicerEM:AtlasCreator:Tests

Atlas Creator Tests

Successful tests running the Atlas Creator are shown here.

01: Fixed with CMTK on 6 Cases

  • Machine: b2-t74-2
    • CPU: 4x Xeon 3 GHz
    • RAM: 32 GB
    • OS: Linux 64
    • AtlasCreator Version: 0.21
  • No. of Cases: 6 (5 against 1 template)
  • Template Type: Fixed
  • Toolkit: CMTK
  • Registration Type: Affine
  • Runtime: 11 minutes

  • Fixed Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 8 output

  • Atlas for label 10 output

  • Checkerboard: Before-Template and After-Template

  • Checkerboard: Before-Template and After-Template 2


02: Fixed with BRAINSFit on 6 Cases

  • Machine: ?
    • CPU: ?
    • RAM: ?
    • OS: ?
    • AtlasCreator Version: 0.21
  • No. of Cases: 6 (5 against 1 template)
  • Template Type: Fixed
  • Toolkit: BRAINSFit
  • Registration Type: Affine
  • Runtime: XX minutes
  • 02template.png

    Fixed Template

  • 02atlas.png

    Combined Atlas output

  • 02atlas3.png

    Atlas for label 3 output

  • 02atlas4.png

    Atlas for label 4 output

  • 02atlas5.png

    Atlas for label 5 output

  • 02atlas6.png

    Atlas for label 6 output

  • 02atlas8.png

    Atlas for label 8 output

  • 02atlas10.png

    Atlas for label 10 output

  • 02exampleBeforeAndAfter.png

    Checkerboard: Before-Template and After-Template

  • 02exampleBeforeAndAfter2.png

    Checkerboard: Before-Template and After-Template 2


03: Dynamic with CMTK on 6 Cases

  • Machine: sbia-pc66
    • CPU: 4x Core i7 2.66 GHz
    • RAM: 8 GB
    • OS: Mac OS X Snow Leopard
    • AtlasCreator Version: 0.21
  • No. of Cases: 6
  • Template Type: Dynamic
  • Iterations: 2
  • Toolkit: CMTK
  • Registration Type: Affine
  • Runtime: 28 minutes

  • Dynamic Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template

04: Dynamic with BRAINSFit on 6 Cases

  • Machine: sbia-pc66
    • CPU: 4x Core i7 2.66 GHz
    • RAM: 8 GB
    • OS: Mac OS X Snow Leopard
    • AtlasCreator Version: 0.21
  • No. of Cases: 6
  • Template Type: Dynamic
  • Iterations: 2
  • Toolkit: BRAINSFit
  • Registration Type: Affine
  • Runtime: 64 minutes

  • Dynamic Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template


05: Fixed with CMTK on 50 Cases

  • Machine: b2-t74-3
    • CPU: 4x Xeon 3 GHz
    • RAM: 32 GB
    • OS: Linux 64
    • AtlasCreator Version: 0.21
  • No. of Cases: 50 (49 against 1 template), skull-stripped + bias corrected
  • Template Type: Fixed
  • Toolkit: CMTK
  • Registration Type: Affine
  • Runtime: 162 minutes

  • Fixed Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template


06: Fixed with BRAINSFit on 50 Cases

  • Machine: b2-t74-3
    • CPU: 4x Xeon 3 GHz
    • RAM: 32 GB
    • OS: Linux 64
    • AtlasCreator Version: 0.21
  • No. of Cases: 50 (49 against 1 template), skull-stripped + bias corrected
  • Template Type: Fixed
  • Toolkit: BRAINSFit
  • Registration Type: Affine
  • Runtime: 241 minutes

  • Fixed Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template


07: Dynamic with BRAINSFit on 50 Cases

  • Machine: b2-t74-3
    • CPU: 4x Xeon 3 GHz
    • RAM: 32 GB
    • OS: Linux 64
    • AtlasCreator Version: 0.21
  • No. of Cases: 50
  • Template Type: Dynamic
  • Iterations: 5
  • Toolkit: BRAINSFit
  • Registration Type: Affine
  • Runtime: 1244 minutes (< 24h)

  • Dynamic Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template

08: Dynamic with CMTK on 50 Cases

  • Machine: b2-t74-1
    • CPU: 4x Xeon 3 GHz
    • RAM: 32 GB
    • OS: Linux 64
    • AtlasCreator Version: 0.21
  • No. of Cases: 50
  • Template Type: Dynamic
  • Iterations: 5
  • Toolkit: CMTK
  • Registration Type: Affine
  • Runtime: 3099 minutes (>48 h)

  • Dynamic Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template

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