Difference between revisions of "2011 Summer Project Week Integrate BRAINSCut into Slicer3"
From NAMIC Wiki
Line 12: | Line 12: | ||
<div style="margin: 20px;"> | <div style="margin: 20px;"> | ||
− | <div style="width: | + | <div style="width: 40%; float: left; padding-right: 3%;"> |
<h3>Objective</h3> | <h3>Objective</h3> | ||
Line 22: | Line 22: | ||
</div> | </div> | ||
− | <div style="width: | + | <div style="width: 40%; float: left; padding-right: 3%;"> |
<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
#:Check dependencies of BRAINSCut | #:Check dependencies of BRAINSCut | ||
#:and integrate into Slicer CLM. | #:and integrate into Slicer CLM. | ||
− | |||
</div> | </div> | ||
− | + | </div> | |
− | <div | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
Line 37: | Line 35: | ||
<!-- Fill this out before Friday's summary presentations - list what you did and how well it worked. --> | <!-- Fill this out before Friday's summary presentations - list what you did and how well it worked. --> | ||
− | |||
− | |||
− | |||
<div style="width: 97%; float: left;"> | <div style="width: 97%; float: left;"> | ||
Line 45: | Line 40: | ||
==References== | ==References== | ||
− | + | #Powell, S., Magnotta, V., Johnson, H., and . . . , V. J., “Registration and machine learning-based automated segmentation of subcortical and cerebellar brain . . . ,” NeuroImage (Jan 2008) | |
+ | #Eun Young Kim, Hans Johnson, "Multi-structure segmentation of multi-modal brain images using artificial neural networks", SPIE Proceedings Paper(Mar 2010) | ||
==Delivery Mechanism== | ==Delivery Mechanism== | ||
Revision as of 15:09, 23 June 2011
Home < 2011 Summer Project Week Integrate BRAINSCut into Slicer3Integrate BRAINSCut into Slicer3
Key Investigators
- University of Iowa: Eunyoung(Regina) Kim
Objective
- Integration of BRAINSCut into Slicer3/Slicer4
- Integration of GMI feature images into BRAINSCut
- Test BRAINSCut
Approach, Plan
- Check dependencies of BRAINSCut
- and integrate into Slicer CLM.
Progress
References
- Powell, S., Magnotta, V., Johnson, H., and . . . , V. J., “Registration and machine learning-based automated segmentation of subcortical and cerebellar brain . . . ,” NeuroImage (Jan 2008)
- Eun Young Kim, Hans Johnson, "Multi-structure segmentation of multi-modal brain images using artificial neural networks", SPIE Proceedings Paper(Mar 2010)
Delivery Mechanism
This work will be delivered to the NAMIC Kit as a
- NITRIC distribution
- Slicer Module
- Built-in:
- Extension -- commandline:
- Extension -- loadable: