Difference between revisions of "2012 Winter Project Week:GBMseg"

From NAMIC Wiki
Jump to: navigation, search
Line 1: Line 1:
 
==Key Investigators==
 
==Key Investigators==
−
* UNC: Isabelle Corouge, Casey Goodlett, Guido Gerig
+
* WUSM: Dan Marcus, Misha Milchenko
−
* Utah: Tom Fletcher, Ross Whitaker
+
* Brigham and Women's: Andrey Fedorov
  
 
<div style="margin: 20px;">
 
<div style="margin: 20px;">
Line 7: Line 7:
  
 
<h3>Objective</h3>
 
<h3>Objective</h3>
−
We are developing methods for analyzing diffusion tensor data along fiber tracts. The goal is to be able to make statistical group comparisons with fiber tracts as a common reference frame for comparison.
+
We are looking to segment and visualize GBM's from various MR sequences in Slicer, and create an integrated display for clinisian review, both radiologist and non-radiologist.
−
 
 
−
 
 
−
 
 
−
 
 
−
 
 
  
 
</div>
 
</div>
Line 20: Line 15:
 
<h3>Approach, Plan</h3>
 
<h3>Approach, Plan</h3>
  
−
Our approach for analyzing diffusion tensors is summarized in the IPMI 2007 reference below.  The main challenge to this approach is <foo>.
+
The approach is to obtain accurate registration of a number of MR sequences of each tumor case, and analyze correlation with pathology data.
−
 
 
−
Our plan for the project week is to first try out <bar>,...
 
  
 
</div>
 
</div>
Line 29: Line 22:
  
 
<h3>Progress</h3>
 
<h3>Progress</h3>
−
Software for the fiber tracking and statistical analysis along the tracts has been implemented. The statistical methods for diffusion tensors are implemented as ITK code as part of the [[NA-MIC/Projects/Diffusion_Image_Analysis/DTI_Software_and_Algorithm_Infrastructure|DTI Software Infrastructure]] project. The methods have been validated on a repeated scan of a healthy individual. This work has been published as a conference paper (MICCAI 2005) and a journal version (MEDIA 2006). Our recent IPMI 2007 paper includes a nonparametric regression method for analyzing data along a fiber tract.
 
−
 
−
 
 
</div>
 
</div>
 
</div>
 
</div>
  
 
<div style="width: 97%; float: left;">
 
<div style="width: 97%; float: left;">
 +
 
==Delivery Mechanism==
 
==Delivery Mechanism==
  

Revision as of 16:00, 5 January 2012

Home < 2012 Winter Project Week:GBMseg

Key Investigators

  • WUSM: Dan Marcus, Misha Milchenko
  • Brigham and Women's: Andrey Fedorov

Objective

We are looking to segment and visualize GBM's from various MR sequences in Slicer, and create an integrated display for clinisian review, both radiologist and non-radiologist.

Approach, Plan

The approach is to obtain accurate registration of a number of MR sequences of each tumor case, and analyze correlation with pathology data.

Progress

Delivery Mechanism

This work will be delivered to the NA-MIC Kit as a (please select the appropriate options by noting YES against them below)

  1. ITK Module
  2. Slicer Module
    1. Built-in
    2. Extension -- commandline
    3. Extension -- loadable
  3. Other (Please specify)

References

Retrieved from "https://www.na-mic.org/w/index.php?title=2012_Winter_Project_Week:GBMseg&oldid=72861"