RSNA2012 Planning

RSNA hands-on courses

Nb	Tutorial slides	Datasets	Tools	Slicer Modules	Developer	Clinical Expert
Classroom Course 1 - ICIA32, Nov.27, 12:30-2:00 pm	3D Visualization of DICOM Data for Radiology Applications	I ICIA 32 dataset	Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking	Data, Volumes, Models, Scene Views + DICOM ( note: the DICOM part will be a new addition to the slides)	Steve	Sonia
Classroom Course 2 - ICIA11, Nov.25, 11:00-12:30 pm	Quantitative Imaging Tutorial	ICIA 11 datasets: PETCTFusion and Change Tracker	Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit	Change Tracker, Volume Rendering, BRAINSFit, CropVolume}	Steve	Sonia

Quantitative Imaging Reading Room

Tentative list of demonstrations for the RSNA 2012 Slicer booth. Needs further development and testing Note: RSNA demo machines will need nvidia graphics cards to get GPU Volume Rendering

Nb	DEMO	Datasets	Notes	Tools	Slicer Modules	Developer	Clinical Expert
0	3D Visualization of DICOM images for Radiology Applications	RSNA datasets	3D Visualization for Radiology Applications	Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking	Data, Volumes, Models, Scene Views	TBD	TBD
1	Data Loading and Visualization	Slicer3Visualization Data	‎ Slicer4Visualization Tutorial	Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking (?)	Data, Volumes, Models, Scene Views	TBD	TBD
2	MRI-based topographic parcellation of human brain	EM Segmenter Data	registration, segmentation EMSegmenter Tasks	EM Segmenter	EMSegmenter	TBD	TBD
3	Volume Rendering #1 Head	Head CT Scan (Osirix Manix Dataset)	show cropping, transfer functions, GPU, slice composite view, Annotations	Volume Rendering and Annotations	Volume Rendering, Annotations, Scene Views	TBD	TBD
4	Volume Rendering #2 Abdomen	Abdominal CT scan with AAA (Osirix Panoramix Dataset)	show cropping, transfer functions, GPU, slice composite view, Annotations	Volume Rendering and Annotations	Volume Rendering, Annotations, Scene Views	TBD	TBD
5	Volume Rendering #3 Thorax	Thoracic CT scan	show cropping, transfer functions, GPU, slice composite view, Annotations	Volume Rendering and Annotations	Volume Rendering, Annotations, Scene Views	TBD	TBD
6	Traumatic Brain Injury Case Analysis	TBI Demo Data (UCLA)	TBI tutorial	ABC Segmentation, Model Maker, Editor, Annotations	Data, ABC Segmentation, Model Maker, Editor, Annotations, Scene Views	TBD	TBD
7	Radiotherapy	Plastimatch Dose Warping Data (MGH)	Plastimatch Tutorial	Plastimatch, DVH extension (Csaba)	Data, Plastimatch Extension: DICOM/DICOM-RT Import, DICOM/DICOM-RT Export, B-Spine Deformable Registration,XFORMWARP Warping with transform Transforms,	Csaba	Andras
8	White matter exploration for neurosurgical planning	White Matter Exploration dataset	Neurosurgical planning Tutorial]	Diffusion ( Estimation, Tractography, Fiducial Seeding), Editor, Model Maker	Data, Volumes, Editor, Fiducials, Diffusion Tensor Estimation, Diffusion Tensor Scalar Measurements, Labelmap Seeding, Tractography Fiducial Seeding, Tractography Display	TBD	TBD
9	Longitudinal analysis of meningioma growth	Change Tracker Data are part of the tutorial	Quantitative Imaging Tutorial	Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit	Change Tracker, Volume Rendering, BRAINSFit, CropVolume	TBD	TBD
10	Image-guided prostate interventions	Prostate Data updated for Slicer4, in progress Can load RSNA2010 demo scene, mostly working, see [1]	Pre-op/Intra-op registration; Use Case Demo Prostate Data	Linked Viewing	Annotations, Models, Crosshairs, CompareViews	Nicole	Andrey
11	Brain Atlas	NAC Multi-modality MRI-based Atlas of the Brain	Work in progress - atlases are being updated	Linked Viewing	Data, Volumes, Models, Scene Views	Nicole	Marianna
12	Abdomen Atlas	Knee Atlas	Work in progress - atlases are being updated	Linked Viewing	Data, Volumes, Models, Scene Views	Nicole	Marianna
13	Knee Atlas Atlas	Abdominal Atlas	Work in progress - atlases are being updated	Linked Viewing	Data, Volumes, Models, Scene Views	Nicole	Marianna

Process

TODO: how to write a python test for a demo or tutorial

List of Slicer Modules involved in RSNA tutorials & demos

• Data
• Welcome to Slicer
• Volumes
• Models
• Scene Views
• Annotations
• Volume Rendering
• Editor
• Model Maker
• Diffusion Tensor Estimation
• Diffusion Tensor Scalar Measurements
• Tractography Labelmap Seeding
• Tractography Fiducial Seeding
• Tractography Display
• BRAINSTools
• Change Tracker
• CropVolume
• Extensions:
  • ABC
  • Plastimatch
  • EMSegmenter
  • Skull Stripper
  • Reporting

• Documentation: We need all core modules reasonably well documented.