Difference between revisions of "2014 Winter Project Week:XNATSlicerLink"
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<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | * Extend or build a module upon the existing XNATSlicer module (https://github.com/skumar221/XNATSlicer). | + | * Extend or build a module upon the existing XNATSlicer module (https://github.com/skumar221/XNATSlicer) of Sunil Kumar. |
* Use custom variables in XNAT to store the description (and possibly other relevant information). | * Use custom variables in XNAT to store the description (and possibly other relevant information). | ||
</div> | </div> | ||
<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
| − | * | + | * Approach 1: Store annotation files only. |
| + | * Approach 2: Store mrb file without image. More generic as is can include other data | ||
| + | * Started implementing approach 2) but encountered some problems which have to be discussed with Sunil. | ||
</div> | </div> | ||
</div> | </div> | ||
Revision as of 04:30, 10 January 2014
Home < 2014 Winter Project Week:XNATSlicerLink
Key Investigators
- Erwin Vast (ErasmusMC, The Netherlands)
- Nicole Aucoin, BWH
- Andrey Fedorov, BWH
Project Description
Objective
- Radiologist sometimes would like to make an annotation on an existing CT/MRI/US image. 3D Slicer contains a module to create different kind of annotations.
- The focus of this project is to store annotations created in 3D Slicer in XNAT. XNAT (http://xnat.org) is a framework for storing image (derived) data.
- The annotations should be downloadable in the XNAT webinterface.
- It should be possible to store a description accompanied with the annotation.
- The annotations should be downloadable and viewable in 3D Slicer.
- The interface should not only support DICOM, but also NIFTI and other relevant image filetypes.
Approach, Plan
- Extend or build a module upon the existing XNATSlicer module (https://github.com/skumar221/XNATSlicer) of Sunil Kumar.
- Use custom variables in XNAT to store the description (and possibly other relevant information).
Progress
- Approach 1: Store annotation files only.
- Approach 2: Store mrb file without image. More generic as is can include other data
- Started implementing approach 2) but encountered some problems which have to be discussed with Sunil.
