Difference between revisions of "2014 Summer Prioject Week:AgatstonScoring"
From NAMIC Wiki
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Image:PW-MIT2014.png|[[2014_Summer_Project_Week#Projects|Projects List]] | Image:PW-MIT2014.png|[[2014_Summer_Project_Week#Projects|Projects List]] | ||
Image:CardiacAgatstonModuleIamge.png|[[2014_Summer_Project_Week#Projects|Cardiac Agatston Scoring Module]] | Image:CardiacAgatstonModuleIamge.png|[[2014_Summer_Project_Week#Projects|Cardiac Agatston Scoring Module]] | ||
| + | Image:CardiacAgatstonMeasuresModuleScreenshot.jpg|[[2014_Summer_Project_Week#Projects|Cardiac Agatston Scoring Extension]] | ||
| + | Image:CardiacAgatstonSlicerExtension.png|[[2014_Summer_Project_Week#Projects|Cardiac Agatston Scoring Extension]] | ||
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==Project Description== | ==Project Description== | ||
A semi-automated method to segment and identify calcium plaques in coronary arteries to calculate the Agatston score. | A semi-automated method to segment and identify calcium plaques in coronary arteries to calculate the Agatston score. | ||
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| + | Material for the Slicer 4.3.1 Agatston Score Module, University of Iowa, Project Week Summer 2014: | ||
| + | |||
| + | [[File:CardiacAgatstonMeasures TutorialContestSummer2014.zip]] | ||
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| + | [[File:TutorialContest_CardiacAgatstonScoring_2014.pdf]] | ||
<div style="margin: 20px;"> | <div style="margin: 20px;"> | ||
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<div style="width: 27%; float: left; padding-right: 3%;"> | <div style="width: 27%; float: left; padding-right: 3%;"> | ||
<h3>Progress</h3> | <h3>Progress</h3> | ||
| − | * | + | * Added the module as an extension to the Extension Manager in Slicer builds after 06-25-14 |
| + | * Mostly finished the extension tutorial | ||
| + | * Presented tutorial in the tutorial contest | ||
</div> | </div> | ||
</div> | </div> | ||
Revision as of 11:42, 27 June 2014
Home < 2014 Summer Prioject Week:AgatstonScoring
Key Investigators
Jessica Forbes, Hans Johnson
Project Description
A semi-automated method to segment and identify calcium plaques in coronary arteries to calculate the Agatston score.
Material for the Slicer 4.3.1 Agatston Score Module, University of Iowa, Project Week Summer 2014:
File:CardiacAgatstonMeasures TutorialContestSummer2014.zip
File:TutorialContest CardiacAgatstonScoring 2014.pdf
Objective
- Segment calcium plaques
- Calculate a calcium score and label statistics
Approach, Plan
- Threshold cardiac CT using minimum intensity threshold
- Calculate Agatston scores and label statists
Progress
- Added the module as an extension to the Extension Manager in Slicer builds after 06-25-14
- Mostly finished the extension tutorial
- Presented tutorial in the tutorial contest
