Difference between revisions of "2015 Winter Project Week COPD Breakout"

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=== Command Line Tools ===
 
=== Command Line Tools ===
 +
[http://www.na-mic.org/Wiki/images/0/06/BreakoutSession-CIP-CommandLineTools.pptx slides]
  
 
== Testing Infrastructure ==
 
== Testing Infrastructure ==

Revision as of 09:59, 6 January 2015

Home < 2015 Winter Project Week COPD Breakout

Introduction

Project Goals and Funding

History

Brief intro to COPD

Team

Architecture

Chest Imaging Platform (CIP)

Git Repository

Code Structure

CIP has four main components

  • Common: base library
  • Utilities: third party libraries
  • Command Line Tools: Slicer execution model tools
  • cip_python: python library

Building CIP

 git clone https://github.com/acil-bwh/ChestImagingPlatform.git
 mkdir ChestImagingPlatform-build
 cd ChestImagingPlatoform-build
 ccmake ../ChestImagingPlatform

Components and Data type

  • Region/Type structure for labelmaps

Python and CIP

cip_python provides the following functionality:

  • Code base for scale-space particles [1]
  • Phenotype computation framework [2]
  • Nipype interfaces for CLIS [3]


Command Line Tools

slides

Testing Infrastructure

Slicer CIP

Git Repository

MRML Types

Modules Categories

Slicer Module Examples

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