Difference between revisions of "2015 Summer Project Week:Atelectasis Quantification"
From NAMIC Wiki
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==Key Investigators== | ==Key Investigators== | ||
| − | * Ángel Torrado-Carvajal | + | * Ángel Torrado-Carvajal (Universidad Rey Juan Carlos) |
| − | * Carolina Romero | + | * Carolina Romero (Hospital Clínico Universitario de Valencia) |
| − | * Norberto Malpica | + | * Norberto Malpica (Universidad Rey Juan Carlos) |
==Project Description== | ==Project Description== | ||
Latest revision as of 15:28, 24 June 2015
Home < 2015 Summer Project Week:Atelectasis Quantification
Screnshot of the Atelectasis Quantification module
Key Investigators
- Ángel Torrado-Carvajal (Universidad Rey Juan Carlos)
- Carolina Romero (Hospital Clínico Universitario de Valencia)
- Norberto Malpica (Universidad Rey Juan Carlos)
Project Description
Atelectasis is the collapse of part or (much less commonly) all of a lung. It is caused by a blockage of the air passages (bronchus or bronchioles) or by pressure on the outside of the lung. Traditional diagnosis is done performing a 2D measument on one CT slice. In this project we want to compute the actual volumetric spread of the pathology.
Objective
- Develop an easy to use atelectasis quantification tool.
Approach, Plan
- Make use of the CIP platform.
- Create an atelectasis pipeline module GUI (guiding the physician through the process)
- Return the actual quantification of healthy lung and atelectasis.
Progress
- We have identified some issues with the GeneratePartialLungLabelMap CLI in the CIP platform, which is not able to capture all the pathology in the segmentation. Due to this, a new RefineSegmentation CLI should be created.
- We have started creating a new SegmentAtelectasis CLI in the CIP platform.
- We have created a first draft of the Atelectasis Quantification pipeline, which will be included in the SlicerCIP extension.
