Difference between revisions of "Collaboration/Iowa/Meshing/Adding VTK Interactive WWidgets to Slicer3"

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<h1>Progress</h1>
 
<h1>Progress</h1>
  
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Software for the fiber tracking and statistical analysis along the tracts has been implemented. The statistical methods for diffusion tensors are implemented as ITK code as part of the [[NA-MIC/Projects/Diffusion_Image_Analysis/DTI_Software_and_Algorithm_Infrastructure|DTI Software Infrastructure]] project. The methods have been validated on a repeated scan of a healthy individual. This work has been published as a conference paper (MICCAI 2005) and a journal version (MEDIA 2006). Our recent IPMI 2007 paper includes a nonparametric regression method for analyzing data along a fiber tract.
 
  
 
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===References===
 
===References===
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* Fletcher, P.T., Tao, R., Jeong, W.-K., Whitaker, R.T., "A Volumetric Approach to Quantifying Region-to-Region White Matter Connectivity in Diffusion Tensor MRI," to appear Information Processing in Medical Imaging (IPMI) 2007.
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* Shivanna K, Adams BD, Magnotta VA, Grosland NM. "Automating Patient-specific Finite Element Model Development", MICAII 2006.
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* Corouge, I., Fletcher, P.T., Joshi, S., Gilmore, J.H., and Gerig, G., "Fiber Tract-Oriented Statistics for Quantitative Diffusion Tensor MRI Analysis," Medical Image Analysis 10 (2006), 786--798.
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* Shivanna KH, Grosland NM, Russell ME, Pedersen DR. "Diarthrodial Joint Contact Models:  Finite element model development of the human hip", In Press.
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* Corouge, I., Fletcher, P.T., Joshi, S., Gilmore J.H., and Gerig, G., Fiber Tract-Oriented Statistics for Quantitative Diffusion Tensor MRI Analysis, Lecture Notes in Computer Science LNCS, James S. Duncan and Guido Gerig, editors, Springer Verlag, Vol. 3749, Oct. 2005, pp. 131 -- 138
 
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* C. Goodlett, I. Corouge, M. Jomier, and G. Gerig, A Quantitative DTI Fiber Tract Analysis Suite, The Insight Journal, vol. ISC/NAMIC/ MICCAI Workshop on Open-Source Software, 2005, Online publication: http://hdl.handle.net/1926/39 .
 

Revision as of 01:14, 25 June 2007

Home < Collaboration < Iowa < Meshing < Adding VTK Interactive WWidgets to Slicer3

2007_Programming/Project_Week_MIT


Key Investigators

  • Iowa: Kiran Shivanna, Vincent Magnotta, Nicole Grosland
  • Isomics: Steve Pieper
  • Knowledge Vis: Curt Lisle
  • Kitware: Will Schroeder


Objective

Work on integration of the new VTK 3D Widgets into Slicer3 for generation of finite element models. This will also include adding support for structured and unstructered grids into Slicer3

Approach, Plan

The plan for project week is to brainstorm on the best way to integerate the widgets that have been developed at the University of Iowa into Slicer3. Several SLicer3 team members may be consulted to help with this effort.

Progress




References

  • Shivanna K, Adams BD, Magnotta VA, Grosland NM. "Automating Patient-specific Finite Element Model Development", MICAII 2006.
  • Shivanna KH, Grosland NM, Russell ME, Pedersen DR. "Diarthrodial Joint Contact Models: Finite element model development of the human hip", In Press.
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