Difference between revisions of "2011 Summer Project Week Patient Mounted Robot"

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Back to [[NA-MIC_Collaborations|NA-MIC_Collaborations]], [[Algorithm:Site1|Site1 Algorithms]], [[DBP1:Site2|Site2 DBP 1]]
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Back to [[NA-MIC_Collaborations|NA-MIC_Collaborations]], [[Algorithm:Site1|Site1 Algorithms]], [[DBP1:Site2|Site2 DBP 1]]
 
__NOTOC__
 
__NOTOC__
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= '''Computing the Brain Deformation for Image-Guided Neurosurgery''' (The Intelligent Systems of Medicine Laboratory  [http://www.mech.uwa.edu.au/ISML/ link title]
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= Template Project Name Goes Here =
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School of Mechanical Engineering, The University of Western Australia)=
 
  
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=Description=
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Here write a brief overview of your project.
  
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The Intelligent Systems of Medicine Laboratory  (ISML) mission is to work towards improving clinical outcomes through appropriate use of technology. We are interested in biomechanics (both engineering biomechanics and sport biomechanics), biomedical engineering, computer integrated surgery, medical robotics and related fields. We run exciting research projects in these areas, generously funded by The Australian Research Council and other agencies.
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= Description =
  
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We intend to contribute to Na-MIC by providing algorithms for computing the intra-operative brain deformations for image-guided neurosurgery. We treat the brain shift as a continuum mechanics problem involving finite deformations and solve it using non-linear finite element procedures. We use the procedures (non-linear explicit dynamics with Total Lagrangian formulation) that do not require iterations even when applied to non-linear problems and are, therefore, amenable to computing the intra-operative brain deformations in real time (under 150 s) on a standard PC.
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Descriptions and progress go here.  Here is where you write the bulk of your project.  The details given in this Template Project page represent the minimal amount of information that should be included for each project. By housing all of the Project information on a single page, Wiki maintanence is reduced. Now we can link to this page from several other places in the Wiki, such as each site's Site Page, the NA-MIC Collaborations page, Project Week pages, and from the externally visible NA-MIC webpage.
  
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''A Special Note:  Dashed Boxes''
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If a blank space is the first character for a Wiki line, the following text will be listed in a dashed box, such as the one appearing at the top of each Site and Project Page containing the links to go back to previous pages.  Note, that if you entered the edit mode via any of the subheading edit links, upon a "Save page" the blank space at the top of the Wiki page will be removed.  Therefore, you will need to manually add the blank space to maintain the dashed text box at the top of the page.  Dashed boxes are also used at the bottom of the Project Pages to link to applicable Project Week pages.
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''A Special Note about Publications''
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"In Press" publications will be listed in two places on the Wiki (in the "In Press" sections on the Publications page and on the appropriate Project page(s)).  "In Press" publications will not be added to the Publications DB.
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"In Print" publications will be added to the Publications DB with the appropriate Grant number (linking it to the search on the Publications DB) and with the appropriate Project page URL added as a keyword (linking it into the Project page).  Once the publication is added to the DB, it will be removed from it's listing in the two "In Press" sections mentioned above.
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Write access for the publications database will be given out to a few select individuals.  If you do not currently have write access to the publications database, please send the following information to John Melonakos at (jmelonak at ece.gatech.edu), for "In Print" publications only:  1) the final printed version of the PDF, 2) the bibtex entry for the publication, 3) the NA-MIC Project URLs against which this publication should be linked, and 4) any other files that you would like to add to the publication database for this publication.
  
 
= Key Investigators =
 
= Key Investigators =
  
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* Prof. Karol Miller (kmiller@mech.uwa.edu.au), Dr Adam Wittek, Grand Joldes
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* Site1: Person 1, Person 2, Person 3
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* Site2: Person 1
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= Publications [http://www.mech.uwa.edu.au/ISML/publications.htm link title]=
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* Site3: Person 1, Person 2, Person 3, Person 4
  
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*[1] Miller, K., Joldes, G., Lance, D., Wittek, A. (2007) Total Lagrangian explicit dynamics finite element algorithm for computing soft tissue deformation, Communications in Numerical Methods in Engineering. Vol. 23, pp. 121-134, doi: 10.1002/cnm.887, available on-line at [http://www3.interscience.wiley.com/cgi-bin/jissue/109075715 link title].
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= Publications =
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*[2] Wittek, A., Miller, K., Kikinis, R., Warfield, S. K. (2007) Patient-specific model of brain deformation: Application to medical image registration. Journal of Biomechanics. Vol. 40, pp. 919-929, DOI:10.1016/j.jbiomech.2006.02.021, available on-line at [http://www.sciencedirect.com/ link title].
 
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*[3] Joldes, G. R., Wittek, A., Miller, K. (2007) Suite of finite element algorithms for accurate computation of soft tissue deformation for surgical simulation, in Proceedings of Computational Biomechanics for Medicine Workshop, International Conference on Medical Image Computing and Computer-Assisted Intervention MICCAI 2007, Brisbane, Australia, ISBN 13: 978 0 643 09517 5, pp. 65-73.
 
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*[4] Hawkins, T., Wittek, A. and Miller, K. (2006) Comparison of constitutive models of brain tissue for non-rigid image registration, in CD Proceedings of 2nd Workshop on Computer Assisted Diagnosis and Surgery, Santiago, Chile, 4 pages.
 
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*[5] Horton, A., Wittek, A. and K. Miller (2006) Computer simulation of brain shift using an element free Galerkin method, in CD Proceedings of 7th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering CMBBE 2006, Antibes, France, ISBN: 0-9549670-2-X, pp. 906-911.
 
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*[6] Horton, A., Wittek, A. and K. Miller  (2006) Towards meshless methods for surgery simulation. Linear versus non-linear computation of the brain shift, in Proceedings of Computational Biomechanics for Medicine Workshop, International Conference on Medical Image Computing and Computer-Assisted Intervention MICCAI 2006, Copenhagen, Denmark, ISBN 10: 87-7611-149-0, pp. 32-40 [http://www.mech.uwa.edu.au/ISML/publications.htm link title].
 
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*[7] Joldes, G., Wittek, A. and Miller, K. (2006) Improved linear tetrahedral element for surgery simulation, in Proceedings of Computational Biomechanics for Medicine Workshop, International Conference on Medical Image Computing and Computer-Assisted Intervention MICCAI 2006, Copenhagen, Denmark, ISBN 10: 87-7611-149-0, pp. 52-63 [http://www.mech.uwa.edu.au/ISML/ publications.htm link title].
 
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*[8] Joldes, G., Wittek, A. and Miller, K.  (2006) Towards non-linear finite element, computations in real time, in CD Proceedings of 7th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering CMBBE 2006, Antibes, France, ISBN: 0-9549670-2-X, pp. 894-899.
 
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*[9] Miller, K., Joldes, G. and Wittek, A. (2006) New finite element algorithm for surgical simulation, in CD Proceedings of 2nd Workshop on Computer Assisted Diagnosis and Surgery, Santiago, Chile, 4 pages
 
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*[10] Miller, K. Hawkins, T. and Wittek, A. (2006) Linear versus non-linear computation of the brain shift, in CD Proceedings of the 7th International Symposium on Computer Methods in Biomechanics and Biomedical Engineering CMBBE 2006, Antibes, France, ISBN: 0-9549670-2-X, pp. 888-893.
 
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*[11] Miller, K. and Wittek, A. (2006) Neuroimage registration as displacement - zero traction problem of solid mechanics, Lead Lecture in Proceedings of Computational Biomechanics for Medicine Workshop, International Conference on Medical Image Computing and Computer-Assisted Intervention MICCAI 2006, Copenhagen, Denmark, ISBN 10: 87-7611-149-0, pp. 1-12 [http://www.mech.uwa.edu.au/ISML/ publications.htm link title].
 
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*[12] Wittek, A., Kikinis, K., Warfield, S. K., and Miller, K. (2005) Brain shift computation using a fully nonlinear biomechanical model, in Proceedings of 8th International Conference on Medical Image Computing and Computer Assisted Intervention MICCAI 2005 in Lecture Notes in Computer Science 3750 2006, pp. 583-590.
 
  
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''In Print''
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* [http://www.na-mic.org/Special:Publications?text=Projects:MultiscaleShapeSegmentation&submit=Search&keywords=checked NA-MIC Publications Database].
  
 
''In Press''
 
''In Press''
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*[13] AWittek, A., T. Hawkins, and Miller, K. (2008). On the unimportance of constitutive models in computing brain deformation for image-guided surgery (in press). Biomechanics and Modeling in Mechanobiology: 8 pages, doi: 10.1007/s10237-008-0118-1, Springer.
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* Author1, Author2. "Title1". Publisher Info, etc.
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*[14] Grand Joldes, Karol Miller and Adam Wittek (2007) Efficient hourglass control implementation for an uniform strain hexahedra using Total Lagrangian formulation. Communications in Numerical Methods in Engineering (accepted in June 2007), 9 pages, doi: 10.1002/cnm.1034, Wiley.
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* Author1, Author2. "Title2". Publisher Info, etc.
  
 
= Links =
 
= Links =

Revision as of 15:58, 12 May 2008

Home < 2011 Summer Project Week Patient Mounted Robot
Back to NA-MIC_Collaborations, Site1 Algorithms, Site2 DBP 1

Template Project Name Goes Here

Here write a brief overview of your project.

Description

Descriptions and progress go here. Here is where you write the bulk of your project. The details given in this Template Project page represent the minimal amount of information that should be included for each project. By housing all of the Project information on a single page, Wiki maintanence is reduced. Now we can link to this page from several other places in the Wiki, such as each site's Site Page, the NA-MIC Collaborations page, Project Week pages, and from the externally visible NA-MIC webpage.

A Special Note: Dashed Boxes

If a blank space is the first character for a Wiki line, the following text will be listed in a dashed box, such as the one appearing at the top of each Site and Project Page containing the links to go back to previous pages. Note, that if you entered the edit mode via any of the subheading edit links, upon a "Save page" the blank space at the top of the Wiki page will be removed. Therefore, you will need to manually add the blank space to maintain the dashed text box at the top of the page. Dashed boxes are also used at the bottom of the Project Pages to link to applicable Project Week pages.

A Special Note about Publications

"In Press" publications will be listed in two places on the Wiki (in the "In Press" sections on the Publications page and on the appropriate Project page(s)). "In Press" publications will not be added to the Publications DB.

"In Print" publications will be added to the Publications DB with the appropriate Grant number (linking it to the search on the Publications DB) and with the appropriate Project page URL added as a keyword (linking it into the Project page). Once the publication is added to the DB, it will be removed from it's listing in the two "In Press" sections mentioned above.

Write access for the publications database will be given out to a few select individuals. If you do not currently have write access to the publications database, please send the following information to John Melonakos at (jmelonak at ece.gatech.edu), for "In Print" publications only: 1) the final printed version of the PDF, 2) the bibtex entry for the publication, 3) the NA-MIC Project URLs against which this publication should be linked, and 4) any other files that you would like to add to the publication database for this publication.

Key Investigators

  • Site1: Person 1, Person 2, Person 3
  • Site2: Person 1
  • Site3: Person 1, Person 2, Person 3, Person 4

Publications

In Print

In Press

  • Author1, Author2. "Title1". Publisher Info, etc.
  • Author1, Author2. "Title2". Publisher Info, etc.

Links

  • Link1
  • Link2
Project Week Results:  Jan 2006, Jun 2007
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