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| − | == 2007 AHM Project Half Week ==
| + | <big>'''Note:''' We are migrating this content to the slicer.org domain - <font color="orange">The newer page is [http://www.slicer.org/slicerWiki/index.php/Slicer3:ColorsFiducialsFreesurferModelmaker here]</font></big> |
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| − | * [[Media:2007_Project_Half_Week_Slicer3Colors.ppt | 4 block:Colors]]
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| − | * [[Media:2007_Project_Half_Week_Slicer3Fiducials.ppt | 4 block:Fiducials]]
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| − | * [[Media:2007_Project_Half_Week_Slicer3FreeSurfer.ppt | 4 block:FreeSurfer]]
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| − | * [[Media:2007_Project_Half_Week_Slicer3ModelMaker.ppt | 4 block:ModelMaker]]
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| − | == Colors ==
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| − | * MRML Color nodes implemented
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| − | * basic module UI done, display colours with scalar id, names, color box
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| − | * incorporated color node selector in volumes and models GUIs
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| − | * FreeSurfer default Heat, Green/Red look up tables are supported, as well as reading in default labels and annotation labels, and loading color tables from annotation files.
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| − | * Procedural color nodes expanded, support for vtkColorTransferFunction as well as vtkLookupTable in the viewer widget.
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| − | * Scalar overlays supported in the Models GUI, Display tab.
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| − | * '''TO DO''': continue work on UI
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| − | | |
| − | == Fiducials ==
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| − | | |
| − | * MRML Node for list implemented, GUI for module refined
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| − | * vtkGlyphSource2D subclassed for Slicer, StarBurst option integrated
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| − | * vtkSlicerGlyphSource2D usable in both the main viewer and in 2D slices
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| − | * 3D glyphs of various types implemented for the 3D viewer
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| − | * S. Pieper linked 2D and 3D fiducials, can drag fiducials in 2D
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| − | * Placing fiducials in the 3D window mostly complete
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| − | * '''TO DO''': Support dragging fiducials in the 3D window
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| − | | |
| − | == FreeSurfer ==
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| − | | |
| − | * MGH ITK Reader ported from NAMIC Sandbox, works as any other volume reader now
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| − | * Slicer 2.x source code ported as a Slicer 3 Library, used in Query Atlas scripts
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| − | * FreeSurfer .W surfaces and CURV surfaces are loadable through the Models GUI
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| − | * FreeSurfer scalar overlays are loadable via the Models Display GUI: thickness, curv, sulc, area, annot, and the new volume encoded scalars in MGH format
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| − | * vtkFSLookupTables integrated into MRML Color Nodes
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| − | * Added support to composite two scalar arrays into one
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| − | * color transfer functions support added to MRML Color Nodes for calculating transfer functions when composite two scalar arrays
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| − | * '''TODO''': other volume format support through the GUI instead of just scriptable, support scalar overlay compositing through the GUI
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| − | | |
| − | == ModelMaker ==
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| − | | |
| − | * Implemented as a Command Line Module
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| − | * Added option to write out a MRML file with display nodes giving color information (tries to pick a good default color node to get names from)
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| − | * '''TODO''': waiting for support for XML files as input to the CLI modules so can use a defined vtkMRMLColorNode to name models
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