Difference between revisions of "ARCTIC Tutorial"

From NAMIC Wiki
Jump to: navigation, search
(New page: 300px|thumb =ARCTIC (Automatic Regional Cortical ThIChness) Slicer3 Tutorial= ==Overview== Following this tutorial, you will be able to perform an individual ...)
 
Line 8: Line 8:
 
Following this tutorial, you will be able to perform an individual analysis of regional cortical thickness.
 
Following this tutorial, you will be able to perform an individual analysis of regional cortical thickness.
 
You will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes.  
 
You will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes.  
 +
 +
==Tutorial==
  
  
Line 18: Line 20:
  
 
==Tutorial materials==
 
==Tutorial materials==
BatchMake wrapper (ARCTIC_BatchMake_Wrapper_1.0)‏
+
[http://www.nitrc.org/projects/arctic/ BatchMake wrapper (ARCTIC_BatchMake_Wrapper_1.0)‏]
http://www.nitrc.org/projects/arctic/
 
  
Tutorial dataset(ARCTIC_Tutorial_example_1.0)‏
+
[http://www.nitrc.org/projects/arctic/ Tutorial dataset(ARCTIC_Tutorial_example_1.0)]‏
http://www.nitrc.org/projects/arctic/
 
  
External modules (ARCTIC_Executables_1.0)‏
+
[http://www.nitrc.org/projects/arctic/ External modules (ARCTIC_Executables_1.0)]
http://www.nitrc.org/projects/arctic/
 
  
Pediatic atlas (UNC_Pediatric_Brain_Atlas)‏
+
[http://www.insight-journal.org/midas/item/view/2277 ‏Pediatic atlas (UNC_Pediatric_Brain_Atlas)]‏
http://www.insight-journal.org/midas/item/view/2277
+
  
 
==People==
 
==People==

Revision as of 21:53, 6 January 2009

Home < ARCTIC Tutorial
Arctic Logo.png


ARCTIC (Automatic Regional Cortical ThIChness) Slicer3 Tutorial

Overview

Following this tutorial, you will be able to perform an individual analysis of regional cortical thickness. You will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes.

Tutorial

Softwares

• Slicer3 http://www.slicer.org/pages/Downloads

• BatchMake‏ http://www.batchmake.org/batchmake/resources/software.html

Tutorial materials

BatchMake wrapper (ARCTIC_BatchMake_Wrapper_1.0)‏

Tutorial dataset(ARCTIC_Tutorial_example_1.0)

External modules (ARCTIC_Executables_1.0)

‏Pediatic atlas (UNC_Pediatric_Brain_Atlas)


People

Cedric Mathieu Clement Vachet Martin Styner