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− | Core 1: Algorithms
| + | Back to [[NA-MIC_Collaborations|NA-MIC_Collaborations]] |
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− | * Eric Grimson: [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=7015019&p_grant_num=5R01NS051826-02&p_query=&ticket=23536649&p_audit_session_id=114807056&p_keywords= 5R01NS051826-02 Computational Modeling of Anatomical Shape Distributions]
| + | '''Objective:''' To quantify changes in diffusion properties along the cingulum bundle for schizophrenics and normal controls. |
− | * David Kennedy: [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=7056141&p_grant_num=5K12MH069281-03&p_query=&ticket=23536693&p_audit_session_id=114807056&p_keywords= 5K12MH069281-03 Neuroimaging Neuroinformatics Training Program], [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=6941591&p_grant_num=5R01NS034189-11&p_query=&ticket=23536693&p_audit_session_id=114807056&p_keywords= 5R01NS034189-11 Anatomic Morphologic Analysis of MR Brain Images]
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− | * Allen Tannenbaum:
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− | * Guido Gerig: [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=6690190&p_grant_num=1P50MH064065-01A19002&p_query=&ticket=25176558&p_audit_session_id=165467414&p_keywords= 1P50MH064065-01A19002 Core--Neuroimaging and morphology],
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− | [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=6613380&p_grant_num=2P01CA047982-12A10005&p_query=(Neuroimaging)&ticket=25176624&p_audit_session_id=165467414&p_audit_score=32&p_audit_numfound=1&p_keywords=Neuroimaging 2P01CA047982-12A10005 Shape of Subcortical Brain Structures in Schizophrenia], [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=6988774&p_grant_num=1U54EB005149-010004&p_query=(Neuroimaging)&ticket=25176647&p_audit_session_id=165467414&p_audit_score=21&p_audit_numfound=1&p_keywords=Neuroimaging 1U54EB005149-010004 STRUCTURAL ANALYSIS OF ANATOMICAL SHAPES AND OF WHITE MATTER TRACTS], [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=6613382&p_grant_num=2P01CA047982-12A19003&p_query=(imaging)&ticket=25176711&p_audit_session_id=165467414&p_audit_score=7&p_audit_numfound=1&p_keywords=imaging 2P01CA047982-12A19003 Core--Validation Methodology]
| + | '''Progress:''' We improved the diffusion MRI module in slicer to allow for a better fiber selection (based on multiple regions of interest) as well as fiber clustering. We set up a processing pipeline to allow for statistical computations of fiber diffusion properties across the fibers of a fiber bundle and along the bundle itself. Further, we are in the process of developing a continuous representation of fiber bundles (see Figure) to allow for a more geometric computation of bundle diffusion quantities. |
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− | * Ross Whitaker:
| + | '''Key Investigators:''' |
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− | Core 3: DBP
| + | * Harvard PNL: Marc Niethammer, Sylvain Bouix, Marek Kubicki, Mark Dreusicke, Martha Shenton |
| + | * MIT: CF Westin, Lauren O'Donnell, Raul San Jose |
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− | * Martha Shenton: [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=7141113&p_grant_num=7K05MH070047-03&p_query=&ticket=23604627&p_audit_session_id=115583617&p_keywords= 7K05MH070047-03 Clinical Symptons & Brain Abnormalities in Schizophrenia], [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=7115712&p_grant_num=5R01MH050740-12&p_query=&ticket=23604627&p_audit_session_id=115583617&p_keywords= 5R01MH050740-12 Computerized Image Analyses of MR Scans in Schizophrenia]
| + | '''Links:''' |
− | * Andy Saykin: [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=6934525&p_grant_num=5R01AG019771-05&p_query=&ticket=23604676&p_audit_session_id=115583617&p_keywords= 5R01AG019771-05 Memory Circuitry in MCI and Early Alzheimer's Disease], [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=7106608&p_grant_num=5R01CA101318-04&p_query=&ticket=23604676&p_audit_session_id=115583617&p_keywords= 5R01CA101318-04 Neural Mechanisms of Chemotherapy-Induced Cognitive Dis]
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− | * Steven Potkin: [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=7107205&p_grant_num=5P20RR020837-03&p_query=&ticket=23605260&p_audit_session_id=115583617&p_keywords= 5P20RR020837-03 Transdisciplinary Imaging Genetics Center (1 of 2)(RMI)], [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=7088050&p_grant_num=1U24RR021992-01A1&p_query=&ticket=23605260&p_audit_session_id=115583617&p_keywords= 1U24RR021992-01A1 Function BIRN]
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− | * Jim Kenndy: [http://crisp.cit.nih.gov/crisp/CRISP_LIB.getdoc?textkey=7253142&p_grant_num=5P01MH056193-100001&p_query=&ticket=23605262&p_audit_session_id=115583617&p_keywords= 5P01MH056193-100001 Genetics of childhood onset depression: relation to psychophysiologic measures]
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− | === Compiled for Mike Ackermann on 17:13, 13 September 2006 (EDT) ===
| + | * [[DBP:Harvard:Collaboration:MITDTI|DBP:Harvard:Collaboration:MITDTI]] |
| + | * http://pnl.bwh.harvard.edu/index.html |
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− | * NCBC NA-MIC
| + | '''Representative Image and Descriptive Caption:''' |
− | * DBP Title: STRUCTURAL AND FUNCTIONAL CONNECTIVITY IN SCHIZOPHRENIA
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− | * PI: Martha Shenton
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− | * Grant #:5K05MH070047-04
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− | * HSA:
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− | * funding ends: 31-AUG-2009
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− | ----
| + | <div class="thumb tleft"><div style="width: 402px">[[Image:Cingulum_reseeded_withtrajectories.png|[[Image:400px-Cingulum_reseeded_withtrajectories.png|Cingulum bundle with arclength parameterization.]]]]<div class="thumbcaption"><div class="magnify" style="float: right">[[Image:Cingulum_reseeded_withtrajectories.png|[[Image:magnify-clip.png|Enlarge]]]]</div>Cingulum bundle with arclength parameterization.</div></div></div> |
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− | * NCBC NA-MIC
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− | * DBP Title: STRUCTURAL AND FUNCTIONAL CONNECTIVITY IN SCHIZOPHRENIA
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− | * PI: Martha Shenton
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− | * Grant #:5R01MH050740-12
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− | * HSA*: Douglas Meinecke
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− | * funding ends: 30-JUN-2010
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− | | |
− | ----
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− | | |
− | * NCBC NA-MIC
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− | * DBP Title: STRUCTURAL AND FUNCTIONAL CONNECTIVITY IN SCHIZOPHRENIA
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− | * PI: Andrew Saykin
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− | * Grant #:5R01AG019771-05
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− | * HSA*:
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− | * funding ends: 31-AUG-2007
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− | | |
− | ----
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− | | |
− | * NCBC NA-MIC
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− | * DBP Title: STRUCTURAL AND FUNCTIONAL CONNECTIVITY IN SCHIZOPHRENIA
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− | * PI: Andrew Saykin
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− | * Grant #:5R01CA101318-04
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− | * HSA*:
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− | * funding ends: 31-MAY-2008
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− | | |
− | ----
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− | | |
− | * NCBC NA-MIC
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− | * DBP Title: TRANSDISCIPLINARY IMAGING GENETICS CENTER
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− | * PI: Steven Potkin
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− | * Grant #: 5P20RR020837-03
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− | * HSA*: Greg Farber
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− | * funding ends: 31-JUL-2007
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− | | |
− | ----
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− | | |
− | * NCBC NA-MIC
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− | * DBP Title: FUNCTIONAL IMAGING BIOINFORMATICS RESEARCH NETWORK (FBIRN)
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− | * PI: Steven Potkin
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− | * Grant #: 1U24RR021992-01A1
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− | * HSA*: Greg Farber
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− | * funding ends: 30-NOV-2010
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− | | |
− | ----
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− | | |
− | * NCBC NA-MIC
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− | * DBP Title: FUNCTIONAL IMAGING AND GENETICS IN SCHIZOPHRENIA:THE SEARCH FOR ENDOPHENOTYPES
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− | * PI: James Kennedy
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− | * Grant #: 5P01MH056193-100001
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− | * HSA*: Rajeev Chandok
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− | * funding ends:June 30, 2007.
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