Difference between revisions of "2011 Winter Project Week:Breakout Slicer with Ron"

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=Introduction=
 
=Introduction=
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*This is an advanced topic presentation on Slicer abilities. The intention is to familiarize the NA-MIC community with Slicer abilities.
 
*You have mastered the introductions and you are hungry for more.... :)
 
*You have mastered the introductions and you are hungry for more.... :)
 
**This means that we expect you to at least have worked through the [http://www.slicer.org/slicerWiki/index.php/Slicer_3.6:Training Core Tutorials] before this class.
 
**This means that we expect you to at least have worked through the [http://www.slicer.org/slicerWiki/index.php/Slicer_3.6:Training Core Tutorials] before this class.

Revision as of 13:45, 17 November 2010

Home < 2011 Winter Project Week:Breakout Slicer with Ron
 Back to  Project Week Agenda

Moderator: Ron Kikinis

Logistics

  • What: Advanced capabilities in Slicer
  • Who: All the new DBP engineers, all the participants new to NA-MIC
  • When: Wednesday afternoon: 1pm through 3pm
  • Where: Room XXXX

Introduction

  • This is an advanced topic presentation on Slicer abilities. The intention is to familiarize the NA-MIC community with Slicer abilities.
  • You have mastered the introductions and you are hungry for more.... :)
    • This means that we expect you to at least have worked through the Core Tutorials before this class.
  • Ron and the creators of modules will show you advanced capabilities in Slicer 3.6

Preliminary Program

Data

  • Image data used

  • Case 40 from the fMRI neurosurgery data set on central.xnat.org

  • T1 Weighted SPGR image

  • T2 weighted Bzero image derived from the DWI acquisition

  • FLAIR image

  • SPGR after injection of Gd

  • DTI color by orientation overlayed over T2 baseline

Demos

  • 10 minutes or less per segment
  • Registration (Dominik Meier)
  • Compare view (Jim Miller)
  • Scenesnapshots (Alex Yarmarkovic)
  • Interactive editor (Steve Pieper)
  • Simple measurements and fiducials (Nicole Aucoin)
  • DTI processing (Alex Yarmarkovic, Demian Wasserman)
  • Volume Cropping (Andrey Fedorov)
  • Keyboard and mouse shortcuts (Steve Pieper)
  • Volume Rendering (Yanling Liu/Alex Yarmarkovic)
  • EM segmentation (Kilian Pohl, Marcel Prastawa)

Attendees

  1. Ron Kikinis
  2. Steve Pieper
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