Difference between revisions of "UNC SPHARM-PDM Tutorial"

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==Tutorials==
 
==Tutorials==
  
'''ShapeAnalysisModule tutorial''' :  to perform structural shape analysis.[[Media:ShapeAnalysisModule-Tutorial.ppt|‏ [ppt]]][[Media:ShapeAnalysisModule-Tutorial.pdf|‏ [pdf]]]
+
'''ShapeAnalysisModule tutorial''' :  to perform structural shape analysis.[[Media:ShapeAnalysisModule-Tutorial.ppt|‏ [ppt]]][[Media:ShapeAnalysisModule-Tutorial.pdf|‏ [pdf]]]
  
'''shapeAnalysisMANCOVA_Wizard tutorial''' :  to perform statistical shape analysis.[[Media:shapeAnalysisMANCOVA_Wizard-Tutorial.ppt|‏ [ppt]]][[Media:shapeAnalysisMANCOVA_Wizard-Tutorial.pdf|‏ [pdf]]]
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'''shapeAnalysisMANCOVA_Wizard tutorial''' :  to perform statistical shape analysis.[[Media:shapeAnalysisMANCOVA_Wizard-Tutorial.ppt|‏ [ppt]]][[Media:shapeAnalysisMANCOVA_Wizard-Tutorial.pdf|‏ [pdf]]]
  
 
==Software==
 
==Software==
Slicer3
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Slicer3
 
http://www.slicer.org/pages/Downloads
 
http://www.slicer.org/pages/Downloads
  
BatchMake‏
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BatchMake‏
 
http://www.batchmake.org/batchmake/resources/software.html
 
http://www.batchmake.org/batchmake/resources/software.html
  
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==Tutorial materials==
 
==Tutorial materials==
  
[http://www.nitrc.org/frs/?group_id=308 External modules  -included BatchMake Application-]
+
[http://www.nitrc.org/frs/?group_id=308 External modules  -included BatchMake Application-]
  
'''ShapeAnalysisModule data ''':  
+
'''ShapeAnalysisModule data ''':  
<br> * on NITRC [http://www.nitrc.org/docman/index.php?group_id=308&selected_doc_group_id=760&language_id=1#folder ShapeAnalysisModuleTutorialData_TutorialContestSummer2011]  
+
* on NITRC [http://www.nitrc.org/docman/index.php?group_id=308&selected_doc_group_id=760&language_id=1#folder ShapeAnalysisModuleTutorialData_TutorialContestSummer2011]  
<br> * or directly [[Media:ShapeAnalysisModuleTutorialData_TutorialContestSummer2011.zip|‏ here]]
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* or directly [[Media:ShapeAnalysisModuleTutorialData_TutorialContestSummer2011.zip|‏ here]]
 +
 
 +
'''ShapeAnalysisMANCOVA_Wizard data ''':  ''NB: You can also use the output file of ShapeAnalysisModule.''
 +
* on NITRC [http://www.nitrc.org/docman/index.php?group_id=294&selected_doc_group_id=1966&language_id=1#folder ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011]
 +
* or directly [[Media:ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011.zip|‏ here]]
  
• '''ShapeAnalysisMANCOVA_Wizard data ''': 
 
<br> * on NITRC [http://www.nitrc.org/docman/index.php?group_id=294&selected_doc_group_id=1966&language_id=1#folder ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011]
 
<br> * or directly [[Media:ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011.zip|‏ here]]
 
<br> ''NB: You can also use the output file of ShapeAnalysisModule''.
 
  
 
==Complementary documentation==
 
==Complementary documentation==

Revision as of 19:35, 2 June 2011

Home < UNC SPHARM-PDM Tutorial

SPHARM-PDM (SPherical HARMonic - Point Based Model) Slicer3 Tutorial

Overview

SPHARM-PDM is a tool that computes point-based models using a parametric boundary description. The two following tutorials will allow you to perform :

  • Step by step analysis: With the ShapeAnalysisModule tutorial,you will learn how to load input volumes, run the module to generate triangulated surfaces with inherent correspondences and visualize them thanks to an intuitive quality control.
  • Step by step analysis: With the ShapeAnalysisMANCOVA_Wizard tutorial, you will learn how to use this graphic interface to load meshes, run a group test in order to get statistical result, displayed through MRML scene.


Tutorials

ShapeAnalysisModule tutorial : to perform structural shape analysis.‏ [ppt]‏ [pdf]

shapeAnalysisMANCOVA_Wizard tutorial : to perform statistical shape analysis.‏ [ppt]‏ [pdf]

Software

Slicer3 http://www.slicer.org/pages/Downloads

BatchMake‏ http://www.batchmake.org/batchmake/resources/software.html


Tutorial materials

External modules -included BatchMake Application-

ShapeAnalysisModule data :

ShapeAnalysisMANCOVA_Wizard data : NB: You can also use the output file of ShapeAnalysisModule.


Complementary documentation

Insight Journal : Local Shape Analysis using MANCOVA

People

• Lucile Bompard

• Clement Vachet

• Mark Scully

• Beatriz Paniagua

• Martin Styner