Difference between revisions of "2011 Summer Project Week GBM Masks"
From NAMIC Wiki
| Line 6: | Line 6: | ||
Project Title: '''Obtaining and evaluation of Glioblastoma multiforme (GBM) segmentation masks''' | Project Title: '''Obtaining and evaluation of Glioblastoma multiforme (GBM) segmentation masks''' | ||
==Key Investigators== | ==Key Investigators== | ||
| − | *BWH: | + | *BWH: Andriy Fedorov, Rivka Colen, Tina Kapur, Alex Golby, Ron Kikinis |
*University Hospital of Marburg: Jan Egger, Christopher Nimsky | *University Hospital of Marburg: Jan Egger, Christopher Nimsky | ||
Revision as of 14:07, 18 June 2011
Home < 2011 Summer Project Week GBM Masks
Project Title: Obtaining and evaluation of Glioblastoma multiforme (GBM) segmentation masks
Key Investigators
- BWH: Andriy Fedorov, Rivka Colen, Tina Kapur, Alex Golby, Ron Kikinis
- University Hospital of Marburg: Jan Egger, Christopher Nimsky
Objective
This project aims to obtain Glioblastoma multiforme (GBM) segmentation masks that have been generated by a physician using GrowCut and semi-automated segmentation tools under the medical platform 3D Slicer. Afterwards, the segmentation results are compared via the Dice Similarity Coefficient (DSC) to pure manual slice by slice segmentations.
Approach, Plan
GBM segmentation with Slicer by a trained physician. Measuring segmentation time.
Progress
References
- 3D Slicer (http://www.slicer.org/)
- GrowCutSegmentation (http://www.slicer.org/slicerWiki/index.php/Modules:GrowCutSegmentation-Documentation-3.6)
- Neurosurgery Department of Marburg (http://www.ukgm.de/ugm_2/deu/umr_nch/umr_nch_team.php?id=767)
- Collaboration Project (http://wiki.na-mic.org/Wiki/index.php/Collaboration:Marburg)
Delivery Mechanism
The results will be provided as a publication.
