RSNA2012 Planning

RSNA hands-on courses

Nb	Tutorial slides	Datasets	Tools	Slicer Modules	Developer	Clinical Expert
Classroom Course 1 - ICIA32, Nov.27, 12:30-2:00 pm	3D Visualization of DICOM Data for Radiology Applications	I ICIA 32 dataset	Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking	Data, Volumes, Models, Scene Views + DICOM ( note: the DICOM part will be a new addition to the slides)	Steve	Sonia
Classroom Course 2 - ICIA11, Nov.25, 11:00-12:30 pm	Quantitative Imaging Tutorial	ICIA 11 datasets: PETCTFusion and Change Tracker	Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit	Change Tracker, Volume Rendering, BRAINSFit, CropVolume}	Steve	Sonia

Quantitative Imaging Reading Room

Tentative list of demonstrations for the RSNA 2012 Slicer booth. Needs further development and testing Note: RSNA demo machines will need nvidia graphics cards to get GPU Volume Rendering

Nb	DEMO	Datasets	Notes	Tools	Slicer Modules	Developer	Clinical Expert
0	3D Visualization of DICOM images for Radiology Applications	RSNA datasets	3D Visualization for Radiology Applications	Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking	Data, Volumes, Models, Scene Views	Jim	Sonia
1	Data Loading and Visualization	Slicer3Visualization Data	‎ Slicer4Visualization Tutorial	Compare View, Clipping, Save, Restore, Scene Views, DICOM studies sorting, DICOM networking (?)	Data, Volumes, Models, Scene Views	Jim	Sonia
2	MRI-based topographic parcellation of human brain	EM Segmenter Data	registration, segmentation EMSegmenter Tasks	EM Segmenter	EMSegmenter	Kilian	Ron
3	Volume Rendering #1 Head	Head CT Scan (Osirix Manix Dataset)	show cropping, transfer functions, GPU, slice composite view, Annotations	Volume Rendering and Annotations	Volume Rendering, Annotations, Scene Views	Julien	Ron
4	Volume Rendering #2 Abdomen	Abdominal CT scan with AAA (Osirix Panoramix Dataset)	show cropping, transfer functions, GPU, slice composite view, Annotations	Volume Rendering and Annotations	Volume Rendering, Annotations, Scene Views	Julien	Ron
5	Volume Rendering #3 Thorax	Thoracic CT scan	show cropping, transfer functions, GPU, slice composite view, Annotations	Volume Rendering and Annotations	Volume Rendering, Annotations, Scene Views	Julien	Ron
6	Traumatic Brain Injury Case Analysis	TBI Demo Data (UCLA)	TBI tutorial	ABC Segmentation, Model Maker, Editor, Annotations	Data, ABC Segmentation, Model Maker, Editor, Annotations, Scene Views	Alex	Jack Van Horn
7	Radiotherapy	Plastimatch Dose Warping Data (MGH)	Plastimatch Tutorial	Plastimatch, DVH extension (Csaba)	Data, Plastimatch Extension: DICOM/DICOM-RT Import, DICOM/DICOM-RT Export, B-Spine Deformable Registration,XFORMWARP Warping with transform Transforms,	Csaba	Andras
8	White matter exploration for neurosurgical planning	White Matter Exploration dataset	Neurosurgical planning Tutorial]	Diffusion ( Estimation, Tractography, Fiducial Seeding), Editor, Model Maker	Data, Volumes, Editor, Fiducials, Diffusion Tensor Estimation, Diffusion Tensor Scalar Measurements, Labelmap Seeding, Tractography Fiducial Seeding, Tractography Display	Demian	Ron
9	Longitudinal analysis of meningioma growth	Change Tracker Data are part of the tutorial	Quantitative Imaging Tutorial	Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit	Change Tracker, Volume Rendering, BRAINSFit, CropVolume	Jc	Andrey
10	Image-guided prostate interventions	Prostate Data updated for Slicer4, in progress Can load RSNA2010 demo scene, mostly working, see [1]	Pre-op/Intra-op registration; Use Case Demo Prostate Data	Linked Viewing	Annotations, Models, Crosshairs, CompareViews	Jim	Andrey
11	Brain Atlas	NAC Multi-modality MRI-based Atlas of the Brain	Work in progress - atlases are being updated	Linked Viewing	Data, Volumes, Models, Scene Views	Nicole	Marianna
12	Abdomen Atlas	Knee Atlas	Work in progress - atlases are being updated	Linked Viewing	Data, Volumes, Models, Scene Views	Nicole	Marianna
13	Knee Atlas Atlas	Abdominal Atlas	Work in progress - atlases are being updated	Linked Viewing	Data, Volumes, Models, Scene Views	Nicole	Marianna

Process

We are following the release schedule documented during the 4.2 release planning session.

TODO: how to write a python test for a demo or tutorial

• Adopt-a-demo program
  • For the demos and tutorials listed above, the roles of developer and clinical contact are:
    • clinical expert who is responsible for the data and content of the tutorial and can answer questions about how the program is meant to work. This person should be providing the data and in some cases provides a step by step tutorial.
    • developer / tester who will be responsible for testing that the functionality is working for the demo on all platforms (mac, windows, linux).
  • If there's a tutorial already existing, the developer should be able to go through the testing on all platforms and only contact the tutorial writer with feedback or questions. In the case of demos or atlas datasets, the developer should discuss with the clinical contact about what functionality should be supported and test that this is working as expected on all platforms.
  • In all cases the developer should try to provide a test that loads and manipulates the data, using either a python script or Qt testing, to help automate the testing process for future releases.

List of Slicer Modules involved in RSNA tutorials & demos

• Data
• Welcome to Slicer
• Volumes
• Models
• Scene Views
• Annotations
• Volume Rendering
• Editor
• Model Maker
• Diffusion Tensor Estimation
• Diffusion Tensor Scalar Measurements
• Tractography Labelmap Seeding
• Tractography Fiducial Seeding
• Tractography Display
• BRAINSTools
• Change Tracker
• CropVolume
• Extensions:
  • ABC
  • Plastimatch
  • EMSegmenter
  • Skull Stripper
  • Reporting

• Documentation: We need all core modules reasonably well documented.