Difference between revisions of "UKF Tractography in Slicer 4"

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<h3>Objective</h3>
 
<h3>Objective</h3>
  
* To convert Dr. Rathi's UKF tractography Slicer3 module to a Slicer4 extension
 
  
 
* '''High Priority''':
 
* '''High Priority''':
Line 33: Line 32:
 
   6. Add the 2 utility functions to the extension module and verify if they work.
 
   6. Add the 2 utility functions to the extension module and verify if they work.
  
* Optional:
+
* '''Optional''':
 
   1. Use the VTK library to output the data (.vtp).
 
   1. Use the VTK library to output the data (.vtp).
  
* Future Work:
+
* '''Future Work''':
 
  1. Move from boost to ITK multithreading.
 
  1. Move from boost to ITK multithreading.
  

Revision as of 21:05, 4 January 2013

Home < UKF Tractography in Slicer 4

Key Investigators

  • Ryan Eckbo, BWH, HMS
  • Yogesh Rathi, BWH, HMS
  • Demian Wassermann, BWH, HMS
  • Carl-Fredrik Westin, BWH, HMS

Project Description

Objective


  • High Priority:
  Have a working UKFtractography module in Slicer4 extension:
 1. Change and update the UKFTractography.xml file for receiving a .vtk file as output.
 2. Setup CTest and ensure its working.
 3. Verify that the Tractography module works on a test invivo data set
      a). Verify that the following 4 models work properly.
           1-Tensor, 1-Tensor with Free-water, 2-tensor, 2-tensor with free-water.
 4. Design a logo for the extension module.
 5. Document the module (including utility functions) -- make a wiki page.
     (Include the References to the appropriate papers and make nice snapshots).
 6. Add the 2 utility functions to the extension module and verify if they work.
  • Optional:
 1. Use the VTK library to output the data (.vtp).
  • Future Work:
1. Move from boost to ITK multithreading.


Approach, Plan

Progress