Difference between revisions of "2015 Summer Project Week:T1 mapping"
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Image:PW-Summer2015.png|[[2015_Summer_Project_Week#Projects|Projects List]] | Image:PW-Summer2015.png|[[2015_Summer_Project_Week#Projects|Projects List]] | ||
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* [https://dblab.duhs.duke.edu/modules/QIBAcontent/index.php?id=1 QIBA T1 phantom] | * [https://dblab.duhs.duke.edu/modules/QIBAcontent/index.php?id=1 QIBA T1 phantom] | ||
| − | * [http://europepmc.org/articles/pmc3620726 Basic equations for T1 | + | * [http://europepmc.org/articles/pmc3620726 Basic equations for T1 Mapping] |
| + | * [https://github.com/stevedaxiao/T1_Mapping.git Source code for T1 Mapping Python Version] | ||
| + | * [https://github.com/stevedaxiao/T1_Mapping_CPP.git Source code for T1 Mapping C++ Version] | ||
Revision as of 23:46, 23 June 2015
Home < 2015 Summer Project Week:T1 mapping
T1 Mapping C++ GUI
Key Investigators
- Xiao Da (MGH), Yangming Ou (MGH), Andriy Fedorov (BWH), Jayashree Kalpathy-Cramer (MGH)
- Utsav Pardasani (Observing)
Project Description
T1 mapping estimates effective tissue parameter maps (T1) from multi-spectral FLASH MRI scans with different flip angles. T1 mapping can be used to optimize parameters for a sequence, monitor diseased tissue, measure Ktrans in DCE-MRI and etc.
Objective
- Estimate effective T1 from multi-spectral FLASH MRI scans with different flip angles
- Implement T1 mapping algorithm as a Slicer extension using C++
Approach, Plan
- Start with prostate diffusion module
- Update equations for T1 mapping
- Compare the results using C++, Python, Freesurfer with ground truth of T1 for QIBA phantom
- Test the Slicer module on MGH Brain Tumor MR Data with multiple flip angles
Progress
- Equations have already been updated
- Working on the GUI
- Working on the comparison
