Project Week 25

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A summary of all past Project Events.

Welcome to the web page for the 25th Project Week!

It is a pleasure to announce that the 25th Project week will be held in Catanzaro Lido (Calabria, Italy) on June 26-30, 2017. This is the first time in Italy for the Slicer Community, and the event is organized in cooperation with ImagEngLab. Catanzaro Lido is a city on the Ionian Sea, in the middle of Squillace Gulf where, according to the ancient legend, Odysseus started his journey back to Ithaca. Of course bring your swimsuit...the conference room and the hotel are 20 meters far away from the beach!

This project week is an event endorsed by the MICCAI society.

Please make sure that you are on the NA-MIC Project Week mailing list.

Local Organizing Committee

• Maria Francesca Spadea, PhD
• Paolo Zaffino, PhD.

Hangouts for preparation

1. (Tina Kapur) Hangout #1: April 5th, 2017 - 9.00 AM Boston time: event page (Notes)
2. (Steve Pieper) Hangout #2: Wednesday April 12, 2017, 9am EDT (GMT-4): Web browser based computing: Dockerized Slicer with remote computing and GPU computing; Cornerstone/LesionTracker OHIF; XTK->AMI (threejs); ePad; vtk.js; QWebEngine; hangout page
3. (Andras Lasso) Hangout #3: Wednesday April 19, 2017, 9am EDT (GMT-4) Connecting devices such as surgical navigation, ultrasound, 3D Slicer, PLUS, OpenIGTLink, Augmented reality; hangout page
4. (Tina Kapur) Hangout #4: Wednesday April 26, 2017, 9am EDT (GMT-4) Deep Learning for Detection of Cancer and Instruments; hangout page;
5. (Simon Drouin) Hangout #5: Wednesday May 3, 2017, 9am EDT (GMT-4)Volume Rendering, Augmented Reality, and Virtual Reality. Notes;hangout page
6. (Tina Kapur) Hangout #6: Wednesday May 10, 2017, 9am EDT (GMT-4) For new participants: What is project week and how to get the most out of participating in it? hangout page
7. (Andrey Fedorov) Hangout #7: Wednesday May 17, 2017, 9am EDT (GMT-4) DICOM for Quantitative Imaging and integration with processing applications. hangout page (notes)
8. (Tina Kapur) Hangout #8: Wednesday May 24, 2017, 9am EDT (GMT-4) Review of Projects and teams that have been provided on the wiki page by participants, internationalization strategy for Slicer. hangout page
9. (Francesca Spadea) Hangout #9: Wednesday May 31, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees should join zoom "hangout" page
10. (Tina Kapur) Hangout #10: Wednesday June 7, 2017, 9am EDT (GMT-4) Review of Projects, Project Pages zoom "hangout" page
11. (TBD) Hangout #11: Wednesday June 14, 2017, 9am EDT (GMT-4) TBD zoom "hangout" page
12. (Francesca Spadea) Hangout #12: Wednesday June 21, 2017, 9am EDT (GMT-4) Review of local logistics -- all registered attendees with questions should join zoom "hangout" page

Logistics

• Dates: June 26-30, 2017. Consider staying for one more day (leaving Sunday morning), as a day off in a gorgeous sea place is planned on July 1st. More details in the calendar below.
• Location: Perla del Porto Hotel
  • Booking. Subject line: "Slicer Summer Project Week 2017".
    • Special rates are:
      • Single room, full bed, 79 € per night (1 person)
      • Single room, queen bed 89 € per night (1 person)
      • Double room, queen bed 99 € per night (2 people)
      • Triple room, 110 € (3 people)
• REGISTRATION: To register please visit this page
• Registration Fee: 320€ and it includes lunches, coffee breaks and airport connections
• Hotel: Perla del Porto Hotel. The closest airport is Lamezia Terme Airport (IATA: SUF).
• Transportation from Airport to Hotel Your registration fee includes ground transportation to/from the hotel and airport.
  • Please fill out this form to request transportation https://goo.gl/forms/7vmhxZSHy8Z1A62z2
• Local points of interest (pubs, restaurants, bar): map (constantly updated)

Calendar

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

Projects

Please duplicate this template to create a page for your project.

Please put a brief preliminary title for your project here with some names in parenthesis for potential team members

1. Needle segmentation Project 1 (Guillaume Pernelle, Tina Kapur, Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea)
2. Needle segmentation Project 2 (Paolo Zaffino, Salvatore Scaramuzzino, Francesca Spadea, Guillaume Pernelle, Tina Kapur)
3. DICOM Segmentation support for Cornerstone / OHIF Viewer (Erik Ziegler, Steve Pieper, Marco Nolden, Tina Kapur)
4. Conversion of DICOM single frame MR to Enhanced Multiframe (Michael Onken, Steve Pieper, Andras Lasso, Csaba Pinter)
5. Human-Computer Interaction under sterile conditions (Christian Hansen, Julian Hettig, Benjamin Hatscher, David Black, Marco Nolden, Juan Ruiz)
6. Development and evaluation of new AR visualization techniques to support radiological interventions (Christian Hansen, Florian Heinrich, Andrè Mewes, Juan Ruiz, Marco Nolden)
7. Interactive manipulation of plots and graphs: i) panning; ii) click and drag; iii) data selection (Davide Punzo, Steve Pieper, Jean-Christophe Fillion-Robin)
8. Next generation of volume rendering in VTK (Simon Drouin, Steve Pieper, Ole Vegard Solberg, Andras Lasso)
9. Tracked Ultrasound Standardization IV: Controlling US acquisition (Simon Drouin, Ole Vegard Solberg, Csaba Pinter, Andras Lasso [electronically: Longquan Chen, Adam Rankin])
10. Steerable catheters path planner extension for brain surgery applications (Alberto Favaro, Marlene Pinzi)
11. Improving depth perception in interventional Augmented Reality visualization/(+sonification?) (Simon Drouin, Christian Hansen, David Black)
12. DICOM for Quantitative Imaging and integration with processing applications (Jasmin Metzger, Marco Nolden, Steve Pieper)
13. Intra-operative deformable registration based on dense point cloud reconstruction (Sara Moccia, Andre Mewes, Gino Gulamhussene, Florian Heinrich)
14. Segmentation for improving image registration of preoperative MRI/intraoperative ultrasound images for neuro-navigation (Jennifer Nitsch, Scheherazade Kraß)
15. CNN for pseudoCT generation from T1/T2 MRI (Giampaolo Pileggi, Paolo Zaffino, Salvatore Scaramuzzino, Maria Francesca Spadea, Gino Gulamhussene, Anneke Meyer)
16. Internationalizing Slicer modules (Juan Ruiz Alzola, )
17. Interfacing Slicer to mobile phone-controlled sensors (Juan Ruiz Alzola, )
18. Slicer and 3D Printing (Juan Ruiz Alzola, Mike Halle, Christian Hansen)
19. Slicer export to VR (Juan Ruiz Alzola, Mike Halle,)
20. Deep Learning: Data augmentation for prostate segmentation (Anneke Meyer, Christian Hansen, Andrey Federov)
21. 2D Slice to 3D volume registration to support radiologic interventions (Gino Gulamhussene,)

Registrants

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this registration site.

1. Kikinis, Ron :: Brigham and Women's Hospital, Harvard Medical School, USA
2. Pieper, Steve :: Isomics, Inc., USA
3. Kapur, Tina :: Brigham and Women's Hospital, Harvard Medical School, USA
4. Spadea, Maria Francesca :: Magna Graecia University, Italy
5. Zaffino, Paolo :: Magna Graecia University, Italy
6. Scaramuzzino, Salvatore :: Magna Graecia University/ASL Vercelli, Italy
7. Pileggi, Giampaolo :: Magna Graecia University, Italy/DKFZ, Germany
8. Rackerseder, Julia :: Technische Universität München, Germany
9. Pinter, Csaba :: Queen's University, Canada
10. Kraß, Scheherazade :: University of Bremen, Germany
11. Gerig, Guido :: NYU Tandon School of Engineering, USA
12. Punzo, Davide :: Kapteyn Astronomical Institute, Netherlands
13. Drouin, Simon :: NeuroImaging and Surgical Technologies (NIST) Lab, Canada
14. Lasso, Andras :: School of Computing, Queen's University, Canada
15. Favaro, Alberto :: Politecnico di Milano, Italy
16. Leger, Etienne :: Concordia University, Canada
17. Ziegler, Erik :: Ziegler Consult SAS
18. Onken, Michael :: Open Connections GmbH, Germany
19. Pinzi, Marlene :: Imperial College, UK
20. Nitsch, Jennifer :: University Of Bremen, Germany
21. Moccia, Sara :: Politecnico di Milano, Italy
22. Black, David :: Fraunhofer Institute for Medical Image Computing MEVIS, Bremen, Germany
23. Penzkofer, Tobias :: Charité Universitätsmedizin, Berlin, Germany
24. Hansen, Christian :: Universität Magdeburg, Germany
25. Vegard Solberg, Ole :: Norway
26. Heinrich, Florian :: Universität Magdeburg, Germany
27. Mewes, André :: Universität Magdeburg, Germany
28. Hatscher, Benjamin :: Universität Magdeburg, Germany
29. Hettig, Julian :: Universität Magdeburg, Germany
30. Meyer, Anneke :: Universität Magdeburg, Germany
31. Gulamhussene, Gino :: Universität Magdeburg, Germany
32. Cassetta, Roberto :: Politecnico di Milano, Italy
33. Fillion-Robin, Jean-Christophe :: Kitware, USA
34. Metzger, Jasmin :: DKFZ, Germany
35. Fishbaugh, James :: NYU Tandon School of Engineering, USA
36. Nolden, Marco :: DKFZ, Germany