User:Davisb

Current Projects

Rule Based Segmentation

Status summary

Code is debugged, wrapper works

itk tests work; fixed vtk wrapper; added mask code to vtk wrapper; vtk tests work

How to build module

• get cvs copy of slicer2
  • Scripts/genlib.tcl
  • Scripts/cmaker.tcl
• get svn copy of NAMICSandbox
• create a link to the RuleBasedSegmentation module within slicer2

cd slicer2/Modules
ln -s NAMICSandbox/RuleBasedSegmentation/vtkRuleBasedSegmentation vtkRuleBasedSegmentation

• compile slicer2 with RuleBasedSegmentation module
  • Scripts/genlib.tcl

Problems

• [fixed]Build fails---updated name in cmakelists
• [now working] vtk test does not work---subtle templating error (false assumption) in itk code
• images must be flipped between vtk reader/writers and itk pipeline (how many dimensions?)
• there was a problem with readers and writers for unsigned long data type, changed to unsigned short