AHM 2009

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Introduction

This is the home page for the 2009 NA-MIC all hands meeting (AHM). NA-MIC participants meet for a AHM once a year. The purpose of the AHM is to coordinate, discuss plans and report to NIH officers and the external advisory board (EAB). The external advisory board meets with the NA-MIC leadership immediately after the AHM. In parallel, NA-MIC is organizing a project week. These events, with the exception of the EAB meeting, are open to collaborators and potential collaborators.

For more information about the project weeks in general, click here.

For information about the January 2009 project week, see below or click here.

For information about Utah as a travel destination click here.

View of the City
SLC The 2009 AHM, EAB and Project Week will be held in Salt Lake City, UT, January 5-9 2009.

Agenda

(preliminary)

Time Monday, January 5 Tuesday, January 6 Wednesday, January 7 Thursday, January 8 Friday, January 9
Project Activities in Capitol B-C Project Activities in Capitol B-C Project Activities in Capitol B-C AHM in Capitol A-B, EAB in Olympus B

Project Activities in Olympus A

Project Activities in Capitol B-C
7:30-8:00 Breakfast Breakfast Breakfast Breakfast
8:00-10:00 9:30 Core 1 and 2 PI closed session in Capitol A Project Work
8:00-9:00 How to use NITRC and slicer(Steve, Terry)

9:00-10:00 Using Batchmake and XNAT to process large studies (Julien Jomier and Dan Marcus) in Amethyst 1

Project Work
8:00-9:00 Tutorial Review and Judging Amethyst 1 		8:00 Introduction, Ron Kikinis

8:05 NA-MIC Highlights (Ross Whitaker)
Roadmap Projects
8:35: JHU/Queens (Gabor Fichtinger)
8:55: UNC (Heather Cody)
9:15: PNL (Marek Kubicki)
9.35: Mind Institute (Jeremy Bockolt)

 Project Work
TBD
10:00-10:30 Core 1 and 2 PI closed session Coffee Coffee Coffee Coffee
10:30-12:00 Core 1 and 2 PI closed session Project Work Project Work

TBD

Collaborations
10:30: Iowa collaboration (Nicole Grosland)
10:45: Wake Forest collaboration (Chris Wyatt)
11:00: Georgetown U. collaboration (Kevin Cleary)
11:15: UNC collaboration (Dinggang Shen)
11:30: Mario Negri Collaboration (Luca Antiga)
11:45: Discussion

 Project Work
12:00-1:00 Lunch Lunch
Lunch
 Lunch Adjourn
1:00-3:00 Begin Project Activities: Introduce Projects and Participants DTI Discussion (Sonia, Randy, Others) Amethyst 1 Project Work
Python Modules (Luca Antiga)

Tools and Tutorials (coordinator)
1:00-1:20 Slicer (Steve Pieper)
1:20-1:40 Plug-ins for Slicer (Jim Miller)
1:40-2:00 Non-interactive tools (Stephen Aylward)
2:00-3:00 Tutorial Contest: Presentations by the winners (Randy Gollub)
3:00-3:30 Coffee Coffee Coffee Coffee
3:00-5:00 3:30-4:30 GUI Testing and Developing Test Modules for Slicer (Sebastien) Amethyst 1 3:30-4:30 Cell Segmentation (Alex G)
Project Work
TBD Amethyst 1 		Project Work
3:00-5:00 Meshing Tutorial (Nicole Grosland, Vincent Magnotta)
Iowa_Meshing_Tutorial
Amethyst 1 		EAB
Olympus B
3:00-4:00 Discussion with NA-MIC Leadership
4:00-5:00 Closed Session
05:00-07:00 05:00-06:00 Meshing Breakout 6:00 Optional: Beer at Murphy's (like last year)

Please note that there will be a Core 1&2 Site PI Retreat on the morning of Monday, January 5th. This is a closed session for Core 1&2 Site PIs, with no delegates. The topic is the competitive renewal.

Dates. Venue. Registration

Dates:

  • The All Hands Meeting and External Advisory Board Meeting will be held on Thursday, January 8th.
  • Project Activities will be held rest of the week between Monday, January 5th and Friday, January 9th.

Venue: The venue for the meeting is Marriot City Center, Salt Lake City, Utah Mariott City Center, Salt Lake City, Utah. (Floorplan). Please either call the hotel at 1-801-961-8700 or 1-866-961-8700 (toll free) or book online by December 4, 2008 using the code SCISCIA to get rooms at $139/night. Please note that we do need attendees to use this hotel in order to not incur additional charges for the use of conference rooms.

Registration: We are charging a registration fee to all participants ($200 for AHM only, and $450 for AHM+). The fee covers the costs of the facilities and food provided. In order to keep the fee low, we need to get a sufficient number of hotel nights by our participants. See above for more on this. Please click http://www.sci.utah.edu/namic2009/registration.html for online registration. This registration must be completed by December 12, 2008.

Connectivity We have three wireless access points at the AHM. Two of them are located in the capital ballroom. One is named capital-ballroom, the other is named capital-ballroom2. If one access point doesn't let you connect it is probably overloaded. In that case, please try connecting to the other one.

Attendees

Please follow http://www.sci.utah.edu/namic2009/registration.html to complete your online registration. The organizers will periodically publish the list of registered attendees in the space below. Attendees should NOT add their names in this section. This list is a snapshop as of 01:46, 23 December 2008 (UTC)

  1. Michael Ackerman NA-MIC All Hands Meeting National Library of Medicine at NIH
  2. Luca Antiga NA-MIC All Hands Meeting and Project Week 2009 Mario Negri Institute
  3. Kevin Archie NA-MIC All Hands Meeting and Project Week 2009 Washington University
  4. Nicole Aucoin NA-MIC All Hands Meeting and Project Week 2009 BWH
  5. Stephen Aylward NA-MIC All Hands Meeting and Project Week 2009 Kitware, Inc.
  6. Stephen Aylward NA-MIC All Hands Meeting and Project Week 2009 Kitware
  7. Sebastien Barre NA-MIC All Hands Meeting and Project Week 2009 Kitware, Inc.
  8. Morry Blumenfeld NA-MIC All Hands Meeting EAB
  9. H Jeremy Bockholt NA-MIC All Hands Meeting and Project Week 2009 The Mind Research Network
  10. Sylvain Bouix NA-MIC All Hands Meeting and Project Week 2009 PNL
  11. Josh Cates NA-MIC All Hands Meeting and Project Week 2009 SCI Institute
  12. German Cavelier NA-MIC All Hands Meeting NIH-NIMH
  13. Kiyoyuki Chinzei NA-MIC All Hands Meeting and Project Week 2009 AIST
  14. Kevin Cleary NA-MIC All Hands Meeting Georgetown University
  15. Manasi Datar NA-MIC All Hands Meeting and Project Week 2009 SCI Institute
  16. Michal Depa NA-MIC All Hands Meeting and Project Week 2009 MIT CSAIL
  17. Harish Doddi NA-MIC All Hands Meeting and Project Week 2009 Stanford University
  18. Andriy Fedorov NA-MIC All Hands Meeting and Project Week 2009 SPL-BWH
  19. Gabor Fichtinger NA-MIC All Hands Meeting Queens Univ
  20. Yi Gao NA-MIC All Hands Meeting and Project Week 2009
  21. Arnaud Gelas NA-MIC All Hands Meeting and Project Week 2009 Harvard Medical School
  22. Guido Gerig NA-MIC All Hands Meeting and Project Week 2009 SCI Institute
  23. Polina Golland NA-MIC All Hands Meeting and Project Week 2009 MIT CSAIL
  24. Randy L. Gollub NA-MIC All Hands Meeting and Project Week 2009 MGH
  25. Casey Goodlett NA-MIC All Hands Meeting and Project Week 2009 SCI Institute
  26. Alexandre Gouaillard NA-MIC All Hands Meeting and Project Week 2009 Harvard Medical School
  27. Sylvain Gouttard NA-MIC All Hands Meeting and Project Week 2009 SCI Institute
  28. Jeffrey Grethe NA-MIC All Hands Meeting and Project Week 2009 UC San Diego
  29. Nicole Grosland NA-MIC All Hands Meeting and Project Week 2009 The University of Iowa
  30. Daniel Haehn NA-MIC All Hands Meeting and Project Week 2009 SPL-BWH
  31. Nathan Hageman NA-MIC All Hands Meeting and Project Week 2009 UCLA
  32. Nobuhiko Hata NA-MIC All Hands Meeting and Project Week 2009 Brigham and Womens Hospital
  33. Kathryn Hayes NA-MIC All Hands Meeting and Project Week 2009 Brigham and Womens Hospital
  34. Heather Cody Hazlett NA-MIC All Hands Meeting University of North Carolina
  35. Jaesung Hong NA-MIC All Hands Meeting and Project Week 2009 Kyushu University
  36. Luis Ibanez NA-MIC All Hands Meeting and Project Week 2009 Kitware, Inc.
  37. Chris Johnson NA-MIC All Hands Meeting and Project Week 2009 EAB
  38. Ron Kikinis NA-MIC All Hands Meeting and Project Week 2009 SPL - BWH
  39. Ivan Kolesov NA-MIC All Hands Meeting and Project Week 2009 Georgia Tech
  40. Karthik Krishnan NA-MIC All Hands Meeting and Project Week 2009 Kitware, Inc.
  41. Marek Kubicki NA-MIC All Hands Meeting and Project Week 2009 PNL_BWH
  42. Curtis Lisle NA-MIC All Hands Meeting and Project Week 2009 KnowledgeVis, LLC
  43. Yanling Liu NA-MIC All Hands Meeting and Project Week 2009 SAIC-Frederick, Inc.
  44. Zhexing Liu NA-MIC All Hands Meeting and Project Week 2009 NIRAL, UNC
  45. Terry Lorber NA-MIC All Hands Meeting and Project Week 2009 Isomics, Inc
  46. Bill Lorensen NA-MIC All Hands Meeting and Project Week 2009 EAB
  47. Vincent Magnotta NA-MIC All Hands Meeting and Project Week 2009 The University of Iowa
  48. Daniel Marcus NA-MIC All Hands Meeting and Project Week 2009 Washington University
  49. Katie Mastrogiacomo NA-MIC All Hands Meeting and Project Week 2009 SPL - BWH
  50. Cedric Mathieu NA-MIC All Hands Meeting and Project Week 2009 UNC
  51. Bjoern Menze NA-MIC All Hands Meeting and Project Week 2009 MIT CSAIL
  52. Mikhail Milchenko NA-MIC All Hands Meeting Washington University in St Louis
  53. James Miller NA-MIC All Hands Meeting and Project Week 2009
  54. Vandana Mohan NA-MIC All Hands Meeting and Project Week 2009 Georgia Inst of Technology
  55. kishore mosaliganti NA-MIC All Hands Meeting and Project Week 2009 Harvard Medical School
  56. Sandy Napel NA-MIC All Hands Meeting EAB
  57. Marc Niethammer NA-MIC All Hands Meeting and Project Week 2009 UNC Chapel Hill
  58. Guy Nir NA-MIC All Hands Meeting and Project Week 2009 Technion
  59. Ipek Oguz NA-MIC All Hands Meeting and Project Week 2009 UNC
  60. Saikat Pal NA-MIC All Hands Meeting and Project Week 2009 Stanford University
  61. Steve Pieper NA-MIC All Hands Meeting and Project Week 2009 Isomics, Inc.
  62. Marcel Prastawa NA-MIC All Hands Meeting and Project Week 2009 SCI Institute
  63. Fred Prior NA-MIC All Hands Meeting EAB
  64. Sonia Pujol NA-MIC All Hands Meeting and Project Week 2009 Surgical Planning Lab, Brigham Womens Hosp
  65. Vidya Rajagopalan NA-MIC All Hands Meeting and Project Week 2009 Virginia Tech
  66. Austin Ramme NA-MIC All Hands Meeting and Project Week 2009 The University of Iowa
  67. Petter Risholm NA-MIC All Hands Meeting and Project Week 2009 Brigham Womens Hospital
  68. James Ross NA-MIC All Hands Meeting and Project Week 2009 SPL-BWH
  69. Marco Ruiz NA-MIC All Hands Meeting and Project Week 2009 UCSD
  70. Raul San Jose NA-MIC All Hands Meeting and Project Week 2009 LMI-BWH
  71. Peter Savadjiev NA-MIC All Hands Meeting and Project Week 2009 Brigham Womens Hospital
  72. William Schroeder NA-MIC All Hands Meeting and Project Week 2009 Kitware, Inc.
  73. Mark Scully NA-MIC All Hands Meeting and Project Week 2009 The Mind Research Network
  74. Madeleine Seeland NA-MIC All Hands Meeting and Project Week 2009 LMI
  75. Gregory Sharp NA-MIC All Hands Meeting and Project Week 2009 MGH
  76. Dinggang Shen NA-MIC All Hands Meeting UNC-Chapel Hill
  77. Kiran Shivanna NA-MIC All Hands Meeting and Project Week 2009 The University of Iowa
  78. Shantanu Singh NA-MIC All Hands Meeting and Project Week 2009 The Ohio State University
  79. Martin Styner NA-MIC All Hands Meeting and Project Week 2009 University of North Carolina
  80. Allen Tannenbaum NA-MIC All Hands Meeting and Project Week 2009 Georgia Tech
  81. Xiaodong Tao NA-MIC All Hands Meeting and Project Week 2009 GE Global Research
  82. Doug Terry NA-MIC All Hands Meeting and Project Week 2009 Psychiatry Neuroimaging Lab
  83. Clement Vachet NA-MIC All Hands Meeting and Project Week 2009 UNC
  84. Koen Van Leemput NA-MIC All Hands Meeting and Project Week 2009 MIT CSAIL
  85. Archana Venkataraman NA-MIC All Hands Meeting and Project Week 2009 MIT CSAIL
  86. Siddharth Vikal NA-MIC All Hands Meeting and Project Week 2009 Queens University
  87. William Wells NA-MIC All Hands Meeting and Project Week 2009 SPL-BWH
  88. Carl-Fredrik Westin NA-MIC All Hands Meeting and Project Week 2009 Brigham and Womens Hospital
  89. Ross Whitaker NA-MIC All Hands Meeting and Project Week 2009 SCI Institute
  90. Nathan Wilson NA-MIC All Hands Meeting Cardiovascular Simulation, Inc.
  91. Chris Wyatt NA-MIC All Hands Meeting
  92. Alexander Yarmarkovich NA-MIC All Hands Meeting and Project Week 2009 ISOMIC
  93. Dr. Terry S Yoo NA-MIC All Hands Meeting DHHSNIHNLM
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