ARCTIC Tutorial

ARCTIC (Automatic Regional Cortical ThIChness) Slicer3 Tutorial

Overview

Following this tutorial, you will be able to perform an individual analysis of regional cortical thickness. You will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes.

Roadmap project : http://www.na-mic.org/Wiki/index.php/DBP2:UNC:Regional_Cortical_Thickness_Pipeline

Softwares

• Slicer3 http://www.slicer.org/pages/Downloads

• BatchMake‏ http://www.batchmake.org/batchmake/resources/software.html

Tutorial materials

• BatchMake wrapper (ARCTIC_BatchMake_Wrapper_1.0)‏

• Tutorial dataset(ARCTIC_Tutorial_example_1.0)‏

• External modules (ARCTIC_Executables_1.0)

• ‏Pediatic atlas (UNC_Pediatric_Brain_Atlas)‏

People

Cedric Mathieu

Clement Vachet

Martin Styner

Heather Cody Hazlett