LupusLesionTutorial

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Lupus Lesion Slicer3 Tutorial

Overview

The following tutorials will allow you to perform an individual analysis of white matter lesions:

• Automatic analysis: in the ARCTIC tutorial, you will learn how to load input volumes, run the end-to-end module ARCTIC to generate cortical thickness information and display output volumes.

Roadmap project : http://wiki.na-mic.org/Wiki/index.php/DBP2:MIND:Roadmap

Tutorials

• ARCTIC tutorial : end-to-end Slicer3 module to perform automatic white matter lesion analysis‏ [ppt]‏ [pdf]

Software

• Slicer3 http://www.slicer.org/pages/Downloads

Tutorial materials

• BatchMake wrapper (ARCTIC_BatchMake_Wrapper_1.0)‏

• Tutorial dataset(ARCTIC_Tutorial_example_1.0)‏

• External modules (ARCTIC_Executables_1.0)

• ‏Pediatric atlas (UNC_Pediatric_Brain_Atlas)‏

People

H Jeremy Bockholt

Mark Scully