Projects:MATLABSlicerExampleModule

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MATLAB Slicer Example Module

The aim of this project to provide a simple command-line module which enables MATLAB code to run within Slicer3. In other words, Slicer3 is used for data I/O, parameter setting, and visualizations. Then, behind-the-scenes, MATLAB code is called to perform image analysis computations.

TEEM is used to pass data back-and-forth between MATLAB and Slicer3, using TEEM-based nrrdLoadWithMetadata() and nrrdSaveWithMetadata() functions.

Key Investigators

• Georgia Tech: John Melonakos, Yi Gao, Allen Tannenbaum
• Isomics: Steve Pieper
• BWH: C-F Westin, Gordon Kindlmann