Non-human Primates Segmentation Tutorial

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Subcortical Segmentation of Rhesus subject

Segmentation of major tissue classes in for vervet subject

Key Investigators

• Chris Wyatt
• Vidya Rajagopalan

Tutorial

• media:EMSegment_TrainingTutorial.pdf Tutorial Slide Handouts (PDF)
• Example Data

Objective

The objective of the tutorial is to enable users to segment non-human primate images using Slicer3

Approach, Plan

The tutorial provides step-by-step instructions to:

• skull strip subject image
• create subject specific tissue atlas from a generic atlas
• use EMSegmenter to segment the subject image.

Progress

A tutorial has been developed, segmentation atlas and data are available for tutorial