Projects:ARRA:SlicerEM:AtlasCreator:Tests

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Atlas Creator Tests

Successful tests running the Atlas Creator are shown here.

01: Fixed with CMTK on 6 Cases

  • Machine: b2-t74-2
    • CPU: 4x Xeon 3 GHz
    • RAM: 32 GB
    • OS: Linux 64
    • AtlasCreator Version: 0.21
  • No. of Cases: 6 (5 against 1 template)
  • Template Type: Fixed
  • Toolkit: CMTK
  • Registration Type: Affine
  • Runtime: 11 minutes

  • Fixed Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 8 output

  • Atlas for label 10 output

  • Checkerboard: Before-Template and After-Template

  • Checkerboard: Before-Template and After-Template 2


02: Fixed with BRAINSFit on 6 Cases

  • Machine: ?
    • CPU: ?
    • RAM: ?
    • OS: ?
    • AtlasCreator Version: 0.21
  • No. of Cases: 6 (5 against 1 template)
  • Template Type: Fixed
  • Toolkit: BRAINSFit
  • Registration Type: Affine
  • Runtime: XX minutes
  • 02template.png

    Fixed Template

  • 02atlas.png

    Combined Atlas output

  • 02atlas3.png

    Atlas for label 3 output

  • 02atlas4.png

    Atlas for label 4 output

  • 02atlas5.png

    Atlas for label 5 output

  • 02atlas6.png

    Atlas for label 6 output

  • 02atlas8.png

    Atlas for label 8 output

  • 02atlas10.png

    Atlas for label 10 output

  • 02exampleBeforeAndAfter.png

    Checkerboard: Before-Template and After-Template

  • 02exampleBeforeAndAfter2.png

    Checkerboard: Before-Template and After-Template 2


03: Dynamic with CMTK on 6 Cases

  • Machine: sbia-pc66
    • CPU: 4x Core i7 2.66 GHz
    • RAM: 8 GB
    • OS: Mac OS X Snow Leopard
    • AtlasCreator Version: 0.21
  • No. of Cases: 6
  • Template Type: Dynamic
  • Iterations: 2
  • Toolkit: CMTK
  • Registration Type: Affine
  • Runtime: 28 minutes

  • Dynamic Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template

04: Dynamic with BRAINSFit on 6 Cases

  • Machine: sbia-pc66
    • CPU: 4x Core i7 2.66 GHz
    • RAM: 8 GB
    • OS: Mac OS X Snow Leopard
    • AtlasCreator Version: 0.21
  • No. of Cases: 6
  • Template Type: Dynamic
  • Iterations: 2
  • Toolkit: BRAINSFit
  • Registration Type: Affine
  • Runtime: 64 minutes

  • Dynamic Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template


05: Fixed with CMTK on 50 Cases

  • Machine: b2-t74-3
    • CPU: 4x Xeon 3 GHz
    • RAM: 32 GB
    • OS: Linux 64
    • AtlasCreator Version: 0.21
  • No. of Cases: 50 (49 against 1 template)
  • Template Type: Fixed
  • Toolkit: CMTK
  • Registration Type: Affine
  • Runtime: 162 minutes

  • Fixed Template

  • Combined Atlas output

  • Atlas for label 3 output

  • Atlas for label 4 output

  • Atlas for label 5 output

  • Atlas for label 6 output

  • Atlas for label 7 output

  • Atlas for label 8 output

  • Atlas for label 9 output

  • Atlas for label 10 output

  • Atlas for label 31 output

  • Atlas for label 32 output

  • Checkerboard: Before-Template and After-Template

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