Home < Tests of Iowa Workshop tutorialsIowa 2012 Workshop Materials
| Tutorial Name |
Tutorial Data |
Platform |
Slicer Version |
Test Date |
Test Author & Comments/Mantis Links
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| Slicer4.1 DTI Tutorial |
Diffusion Data |
Mac OS Lion |
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| Slicer4.1 DTI Tutorial |
Diffusion Data |
Mac OS Snow Leopard |
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| Slicer4.1 DTI Tutorial |
Diffusion Data |
Windows 7 32 |
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| Slicer4.1 DTI Tutorial |
Diffusion Data |
Windows XP |
2012-03-17 |
3/18.12 |
Steve
Everything works except turning on glyphs after label map seeding, which results in a crash due to lack of memory. Suggestion is to skip this step of the tutorial for users on win32. Another option is to only segment a single slice of the corpus in order to generate fewer tracts. Also it might help to delete the dwi volume after tensor estimation. When I did these steps I was able to complete all steps of the tutorial.
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| Slicer4.1 DTI Tutorial |
Diffusion Data |
Linux Unbuntu 64 |
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| Slicer4.1 DTI Tutorial |
Diffusion Data |
Linux 64 (debug) |
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| Slicer4 DTI Tutorial |
Diffusion Data |
Linux 64 (debug) |
r19517 |
03/07/2012 |
Nicole: 1793. 1795
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| Slicer4 DTI Tutorial |
Diffusion Data |
Windows 7 64b (package) |
r19577 |
03/13/2012 |
Julien
pdf is 95MB !?!?
Page 22, Popup look is now different
Page 23, in red slice only the popup should still be up (didn't unpin)
Page 25: Diffusion Tensor Estimation has been renamed into DWI to DTI estimation
Page 25: dwi is already selected as Input DWI
Page 25: Minor Bug ! It stays "scheduled" for >5secs, not sure why
Page 26: Popup looks different now
Page 30: shouldn't labda1~labda2 >> lambda3 look more like a smarties ?
Page 32: typo connect ->connects
Page 36: Need to click on ">>" button first
Page 41: Bug ! After apply, the foreground image is reset to none, need to manually set it back to dti
Page 46: After selecting FractionalAnisotropy, Auto WL is automatically selected
Page 48: You might want to include screenshot of Link button again
Page 51: No need to move the mouse in 3D view, it automatically refreshes. If not, then a bug must be reported
Page 57: 1 bullet point has no . at the end(for information, there is no . in the other slides.
Page 60: Advice to use the right/left arrow keys to slice through?
Page 65: No axial slice displayed in 3D
Page 74: explain how to rename?
Page 78: explain to go to Annotation module again ?
Page 79: no need to turn off and on, it automatically refreshed when I placed the fiducial. If not, then a bug must be reported.
Page 81: explain where to place fiducial.
Page 82: Bug, it doesn't recompute automatically
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| Slicer4 DTI Tutorial |
Diffusion Data |
Windows XP 32b |
Slicer 4.1.0 rc1 (r19609) |
03/15/2012 |
Julien
no link for the data mentioned in the tutorial
No mention to what Slicer version the tutorial is compatible with
Page1: Slicer Logo is 4.0, does it mean it's compatible with 4.0 ? no
Page 10: I have 100modules (from log messages dialog CTRL+0)
Page 19: typo: appears in the 2D viewers
Page 22: Add "fit image to window" icon
Page 41: Odd black pixels in fa volume (see email)
Page 58: Add arrow to indicates how to change to yellow layout ?
Page 60: icon of the draw tool ? I first used the paint tool instead
Page 64: no "Minimum Length", only "Minimum Path Length". Bug ? why "Maximum Length" is not also "Maximum Path Length" ?
Page 64: Bug: why only Integration Step Length is (mm) but not others?
Page 66: Click on "Glyph" -> Crash (Slicer= 690Mo)
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| HelloPython Tutorial
|
HelloPythonDataset |
Mac OS Lion |
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| HelloPython Tutorial
|
HelloPythonDataset |
Windows 7 32 |
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| HelloPython Tutorial
|
HelloPythonDataset |
Windows XP |
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| HelloPython Tutorial
|
HelloPythonDataset |
Linux Ubuntu 64 |
Slicer4.1rc1 |
03/16/2012 |
Benjamin
p3 : Image has no link with this tutorial
p16 : The Directory HelloPython has two sub directories "code" and "data". Wrong path.
p21 : Add comment to warn the user about the indentation
p17 : Slicer layout change compare to the previous screenshot
p31 : We are not able to copy properly the text
p35 : helloPython sript path is ".../helloPython/code/"
p36: word "can" is written twice, and I already have 3 items in the sub menu "Exemples"
p48: The Directory HelloPython has two sub directories "code" and "data". Wrong path.
p50: Slicer layout change compare to the previous screenshot
p55: The last line should be on 1 line, or warn the user who may not know how work Python.
p59: Same as p48 and p16
p61: Slicer layout change compare to the previous screenshot
p62: More explanation maybe - Up/Down - Left/Right - ?
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| HelloPython Tutorial
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HelloPythonDataset |
linux 64 (debug) |
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| Neurosurgical Planning Tutorial
|
Neurosurgical Planning dataset |
Mac OS SnowLeopard |
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| Neurosurgical Planning Tutorial
|
Neurosurgical Planning dataset |
Mac OS Lion |
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| Neurosurgical Planning Tutorial
|
Neurosurgical Planning dataset |
Windows 7 32 |
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| Neurosurgical Planning Tutorial
|
Neurosurgical Planning dataset |
Windows XP |
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| Neurosurgical Planning Tutorial
|
Neurosurgical Planning dataset |
Linux Ubuntu 64 |
4.1rc1 |
March 15 |
Steve - worked great - few content comments sent to Sonia
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| Neurosurgical Planning Tutorial
|
Neurosurgical Planning dataset |
Linux 64 (debug) |
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| Data Loading and 3DVisualization
|
3D Visualization dataset |
Mac OS SnowLeopard |
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| Data Loading and 3DVisualization
|
3D Visualization dataset |
Mac OS Lion |
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| Data Loading and 3DVisualization
|
3D Visualization dataset |
Windows 7 32 |
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| Data Loading and 3DVisualization
|
3D Visualization dataset |
Windows XP |
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| Data Loading and 3DVisualization
|
3D Visualization dataset |
Linux Ubuntu 64 |
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| Data Loading and 3DVisualization
|
3D Visualization dataset |
Linux 64 (debug) |
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