User:Davisb
From NAMIC Wiki
Current Projects
Rule Based Segmentation
Status summary: fixing vtk wrapper of itkBayes code---debugging, could be 2 hours, could be 2 days
- build initial copy
- get cvs copy of slicer2
- Scripts/genlib.tcl
- Scripts/cmaker.tcl
- get svn copy of NAMICSandbox
- create a link to the RuleBasedSegmentation module within slicer2
- get cvs copy of slicer2
cd slicer2/Modules ln -s NAMICSandbox/RuleBasedSegmentation/vtkRuleBasedSegmentation vtkRuleBasedSegmentation
- compile slicer2 with RuleBasedSegmentation module
- Scripts/genlib.tcl
- compile slicer2 with RuleBasedSegmentation module
- add tests
- test source is already present in the cxx directory
- update CMakeListsLocal.txt in cxx directory---tests are built in module directory
- added a temporary script RunsTests.sh in the Tests directory to run the itk and vtk tests with and without masks
- copied png images to the Tests directory
- "gold standard" images were incorrect; have been rescaled from [0,1] to [0,255]; so much for gold standard ;)
- Run tests
- itk tests succeed
- vtk tests do not succeed---there is a problem with the wrapper
Problems:
- [fixed]Build fails---updated name in cmakelists
- [temporary tests added] need to add tests
- itk test
- vtk test
- [pending] vtk test does not work
Adding Test
- add testing executables to CMakeListsLocal.txt in cxx directory---exes are build in module directory
- added a temporary script that will run the itk and vtk tests RunTests.sh in the Tests directory