Projects/Diffusion/2007 Project Week Slicer 3 Whole Brain Seeding

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Slicer 3 tractography display.

Key Investigators

• BWH: Raul San Jose, Lauren O'Donnell, Alex Yarmarkovich

Objective

Deployment of whole brain seeding: data structure, fiber tracking and fast query mechanism to support editing operation and ROI-based fiber selection.

Approach, Plan

Our approach is to port the Streamline techniques used in Slicer 2 as a Command Line Module. We plan on looking at a optimal memory representation of a full brain tractography set for optimal querying and retrival of specific fibers according to spatial locations.

Progress

Software for the fiber tracking has been ported.

References