Support for Batch Processing
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Objective:
To develop a command liner interface for the BRAINS3 project that will support batch processing with no graphical user interface.
Possible scripting languages
- TCL
- Python
Progress:
- The BRAINS3 build system is being updated that will allow for integration of ITK, VTK, Slicer3, and BRAINS3 TCL command lines within a single executable. Adapters will then need to be written to pass data between these systems.
- ITK-VTK already exists with WrapITK wrapping.
- BRAINS3-ITK exists and needs to be wrapped with WrapITK.
- Need to determine how to get Data into slicer from VTK or ITK.
Key Investigators:
- University of Iowa: Vincent Magnotta, Hans Johnson, Nancy Andreasen
- The MIND Institute: Jeremy Bockholt
Links:
Papers: