UNC SPHARM-PDM Tutorial
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Contents
SPHARM-PDM (SPherical HARMonic - Point Distribution Model) Slicer3 Tutorial
Overview
SPHARM-PDM is a tool that computes point-based models using a parametric boundary description. The two following tutorials will allow you to perform :
- Step by step analysis: With the ShapeAnalysisModule tutorial,you will learn how to load input volumes, run the module to generate triangulated surfaces with inherent correspondences and visualize them thanks to an intuitive quality control.
- Step by step analysis: With the ShapeAnalysisMANCOVA_Wizard tutorial, you will learn how to use this graphic interface to load meshes, run a group test in order to get statistical result, displayed through MRML scene.
Tutorials
ShapeAnalysisModule tutorial : to perform structural shape analysis. [ppt] [pdf]
shapeAnalysisMANCOVA_Wizard tutorial : to perform statistical shape analysis. [ppt] [pdf]
Software
Slicer3.6.3 http://www.slicer.org/pages/Downloads
Slicer3 External modules -including BatchMake Description files
Tutorial materials
ShapeAnalysisModule data :
- on NITRC ShapeAnalysisModuleTutorialData_TutorialContestSummer2011
- or directly here
ShapeAnalysisMANCOVA_Wizard data : NB: You can also use the output file of ShapeAnalysisModule.
- on NITRC ShapeAnalysisMANCOVA_WizardTutorialData_TutorialContestSummer2011
- or directly here
Complementary documentation
- Paniagua B., Styner M., Macenko M., Pantazis D., Niethammer M, Local Shape Analysis using MANCOVA, Insight Journal, 2009 July-December, http://hdl.handle.net/10380/3124
- Joshua Cates, Manasi Datar, P Thomas Fletcher and Ross Whitaker, ShapeWorksManual
People
Lucile Bompard
Clement Vachet
Beatriz Paniagua
Martin Styner