Slicer4 Diffusion tutorial

• Bug reports with the current Slicer4 release

suggested dead-line March 12, 2012 ( preparation for the Iowa Workshop March 20-21)

• • Brain Mask (assigned to Demian)
  • Color by Orientation (assigned to Demian)
  • Glyphs Visualization (assigned to Alex)
  • Fiducials Seeding (assigned to Alex)
  • Consistency of the GUI in the labelmap and fiducial seeding modules (assigned to Alex)

• Suggested Reorganization of the Diffusion menu (assigned to Demian)
  • Diffusion Data Conversion:
    • DICOM to Nrrd
    • DTIimport/export
  • DWI:
    • Brain Mask
    • Tensor Estimation
    • Denoising
  • DTI
    • Scalar Measurements
    • Tractography
    • Resample

• DicomToNrrdConverter should be DICOM To NRRD Converter, and make the parameters of the Output sections visible on the GUI (assigned to Demian)
• Scalar Measurement computation issue (Planar measure): wrong window and level values in the Volumes module ( assigned to Julien Finet) Is due to extreme values in the data - can this be clamped in the scalar estimation module?
• Slicer crashes when saving the DTI tutorial Scene on Mac (assigned to Steve)

• Tutorial dataset: Slicer4 DTI dataset