2015 Winter Project Week COPD Breakout

Chest Imaging Platform (CIP)

Git Repository

Code Structure

CIP has four main components

• Common: base library
• Utilities: third party libraries
• Command Line Tools: Slicer execution model tools
• cip_python: python library

Building CIP

 git clone https://github.com/acil-bwh/ChestImagingPlatform.git
 mkdir ChestImagingPlatform-build
 cd ChestImagingPlatoform-build
 ccmake ../ChestImagingPlatform

Components and Data type

• CIP conventions

• Region/Type structure for labelmaps

Python and CIP

cip_python provides the following functionality:

• Code base for scale-space particles [1]
• Phenotype computation framework [2]
• Nipype interfaces for CLIS [3]

• Command Line Tools

Testing Infrastructure

• Slides

• Dashboard

Slicer CIP

Git Repository

MRML Types

• RegionType
• Particles