2017 Winter Project Week

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Welcome to the web page for the 24th Project Week!

The 24th NA-MIC Project Week open source hackathon is being held during the week of January 9-13, 2017 at MIT. Please go through this page for information, and if you have questions, please contact Tina Kapur, PhD.

Logistics

  • Dates: January 9-13, 2017.
  • Location: MIT CSAIL, Cambridge, MA. (Rooms: Kiva, R&D)
  • REGISTRATION: Register here. Registration Fee: $330.
  • Hotel: Similar to previous years, no rooms have been blocked in a particular hotel.
  • Next Project Week:' June 26-30, 2017, Catanzaro, Italy

Introduction

The National Alliance for Medical Image Computing (NAMIC), was founded in 2005 and chartered with building a computational infrastructure to support biomedical research as part of the NIH funded NCBC program. The work of this alliance has resulted in important progress in algorithmic research, an open source medical image computing platform 3D Slicer, enhancements to the underlying building blocks VTK, ITK, CMake, and CDash, and the creation of a community of algorithm researchers, biomedical scientists and software engineers who are committed to open science. This community meets twice a year in an open source hackathon event called Project Week.

Project Week is a semi-annual open source hackathon which draws 60-120 researchers. As of August 2014, it is a MICCAI endorsed event. The participants work collaboratively on open-science solutions for problems that lie on the interfaces of the fields of computer science, mechanical engineering, biomedical engineering, and medicine. In contrast to conventional conferences and workshops the primary focus of the Project Weeks is to make progress in projects (as opposed to reporting about progress). The objective of the Project Weeks is to provide a venue for this community of medical open source software creators. Project Weeks are open to all, are publicly advertised, and are funded through fees paid by the attendees. Participants are encouraged to stay for the entire event.

Project Week activities: Everyone shows up with a project. Some people are working on the platform. Some people are developing algorithms. Some people are applying the tools to their research problems. We begin the week by introducing projects and connecting teams. We end the week by reporting progress. In addition to the ongoing working sessions, breakout sessions are organized ad-hoc on a variety of special topics. These topics include: discussions of software architecture, presentations of new features and approaches and topics such as Image-Guided Therapy.

Several funded projects use the Project Week as a place to convene and collaborate. These include NAC, NCIGT, QIICR, and OCAIRO.

A summary of all previous Project Events is available here.

Please make sure that you are on the NA-MIC Project Week mailing list

Conference Calls for Preparation

Conference call phone number and notes are available here.

Agenda

Time Monday, January 9 Tuesday, January 10 Wednesday, January 11 Thursday, January 12 Friday, January 13
Project Presentations Work on Projects Work on Projects Work on Projects Reporting Day
8:30am Breakfast Breakfast Breakfast Breakfast
9:00am-10:30am Clare Tempany led Image-Guided Therapy Discussion 9:00am-10:00am: Shape Analysis Breakout
---- ---- ---- ---- ---- ----
10:00am-12:00pm: Luis Ibanez TensorFlow Workshop 		Fiona Fennessy led Quantitative Imaging for Prostate Cancer Discussion
10:30am-12pm: Sebastien Ourselin, PhD, UCL Talk Project Reporting
12:00pm-1:00pm Lunch Lunch Lunch Lunch Lunch boxes; Adjourn by 1:30pm
1:00-5:30pm 1:00pm-2:30pm: Project Presentations 2:00-3:30pm 2017 Tutorial Contest Review 1:30-2:30pm: AMIGO Tour
5:30pm Adjourn for the day Adjourn for the day Adjourn for the day Adjourn for the day
Dinner on Thursday Night (Optional)

Calendar

The events are listed in the calendar below. Note that due to a current known limitation of our infrastructure, you will need to manually navigate to the week of January 8, 2017 to see the relevant events.


Error in widget Google Calendar: unable to write file /opt/mediawiki/1.33.0/extensions/Widgets/compiled_templates/wrt674367332c02c2_43621526

iCal (.ics) link: https://calendar.google.com/calendar/ical/kitware.com_sb07i171olac9aavh46ir495c4%40group.calendar.google.com/public/basic.ics

Projects

Learning and GPUs

Web Technologies

Visualization

IGT: Navigation, Robotics, Surgical Planning

dMRI

Infrastructure

To be Categorized

Registrants

Do not add your name to this list - it is maintained by the organizers based on your paid registration. To register, visit this registration site.

  1. A, Zeina :: SHBOUL
  2. Aerts, Hugo :: DFCI-Harvard
  3. Alam, Mahbubul :: Old Dominion University
  4. Anderson, Peter :: Retired
  5. Andruejol, Johan :: Kitware, Inc.
  6. Bakeng, Janne Beate :: SINTEF
  7. Beers, Andrew :: Massachusetts General Hospital
  8. Bernal Rusiel, Jorge Luis :: Boston Children's Hospital
  9. Bremer, Erich :: Stony Brook University
  10. Cetin Karayumak, Suheyla :: Brigham and Women's Hospital
  11. Chae, Michael :: Monash University
  12. Chauvin, Laurent :: ETS
  13. Dalca, Adrian :: Massachusetts Institute of Technology
  14. Fedorov, Andriy :: Brigham and Women's Hospital
  15. Fillion-Robin, Jean-Christophe :: Kitware, Inc.
  16. Girault, Alexis :: Kitware, Inc.
  17. Golland, Polina :: Massachusetts Institute of Technology
  18. Gollub, Randy :: Massachusetts General Hospital
  19. Gong, Shun :: Brigham and Women's Hospital
  20. Guerrier de Dumast, Priscille :: University of Michigan
  21. Harris, Gordon :: Massachusetts General Hospital
  22. Herz, Christian :: Brigham and Women's Hospital
  23. Hong, Sungmin :: New York University
  24. Hosny, Ahmed :: Dana-Farber
  25. Jagadeesan, Jayender :: Brigham and Women's Hospital
  26. Kapur, Tina :: Brigham and Women's Hospital
  27. Kikinis, Ron :: Brigham and Women's Hospital
  28. Lisle, Curtis :: KnowledgeVis, LLC
  29. Mastrogiacomo, Katie :: Brigham and Women's Hospital
  30. Mateus, D. :: TUM
  31. Mehrtash, Alireza :: Brigham and Women's Hospital
  32. Meine, Hans :: University of Bremen
  33. Meyer, Anneke :: University of Magdeburg
  34. Miller, James :: GE Research
  35. Mirabel, Clement :: University of Michigan
  36. Nitsch, Jennifer :: University of Bremen
  37. Norton, Isaiah :: Brigham and Women's Hospital
  38. O'Donnell, Lauren :: Brigham and Women's Hospital
  39. Oram, Louise :: The Intervention Centre-Oslo University Hospital
  40. Paniagua, Beatriz :: Kitware, Inc.
  41. Parmar, Chintan :: DFCI-Harvard Medical School
  42. Peled, Sharon :: Brigham and Women's Hospital
  43. Pieper, Steve :: Isomics, Inc.
  44. Pinter, Csaba :: Queen's University
  45. Preiswerk, Frank :: Brigham and Women's Hospital/Harvard Medical School
  46. Pujol, Sonia :: Brigham and Women's Hospital/Harvard Medical School
  47. Rankin, Adam :: Robarts Research Institute
  48. Rheault, Francois :: Université de Sherbrooke
  49. Sharp, Gregory :: Massachusetts General Hospital
  50. Sridharan, Patmaa :: University of Pennsylvania-CBICA
  51. Vidyaratne, Lasitha :: Old Dominion University
  52. Ye, Wu :: Brigham and Women's Hospital
  53. Zeleznik, Roman :: DFCI
  54. Zhang, Fan :: Brigham and Women's Hospital
  55. Zhang, Miaomiao :: Massachusetts Institute of Technology
  56. Ziegler, Erik :: Open Health Imaging Foundation/Mass General Hospital
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