Projects:QIN:3D Slicer Annotation Image Markup:DICOM-based annotations

Back to AIM Annotations integration with 3DSlicer

This page is used to collect examples of the valid DICOM SR annotations.

syngo.via

• Input dataset: CT head, distributed as part of testing data with Slicer: http://viewvc.slicer.org/viewvc.cgi/Slicer3/trunk/Testing/Data/Input/CTHeadAxialDicom/
• Screenshot showing placed annotations and available markup tools

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  GUI showing annotation elements

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  Available markup tools

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  DICOM SR reports side by side with the input imaging data

• zip-file with the input data and the created annotations File:CT head syngo annotated.zip

• the produced DICOM SR objects produce errors while trying to read using DCMTK SR tools (dsrdump). There appears to be a bug in DICOM SR functionality implementation of syngo.via, see this thread: http://forum.dcmtk.org/viewtopic.php?p=13207#13207

• NOTE: the non-compliant storage of SR object has been observed on a specific version of syngo.via available at our institution. We hope this issue has been resolved in the next release (VM11), and we are waiting for it to become available so that we can confirm this.

Advantage Workstation

Status unknown

DICOM SEG

It was confirmed that the following tools are not capable of reading DICOM SEG data produced by syngo.via:

• Osirix 4.1
• Mevislab 2.1
• synedra personal view 3.1.04 x64
• ClearCanvas 2 SP1
• ImageJ 1.45s

QIBA VolCT dataset

• Details http://qibawiki.rsna.org/index.php?title=VolCT_-_Group_1C#Downloadable_Images_and_Data_Sets
• Data available from http://thecancerimagingarchive.net