Difference between revisions of "2010-Slicer-StLouis"

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<br>
 
== Introduction ==  
 
== Introduction ==  
A one-day Slicer tutorial will be held at Washington University in St. Louis on July 1, 2010.  Enrollment is limited to 20 people. The primary objective of this event is to introduce users to the Slicer environment, with a particular focus on its use for neurosurgical applications, fiber tracking, and functional localization.
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A one-day Slicer tutorial will be held at Washington University in St. Louis on July 1, 2010. The primary objective of this event is to introduce users to the Slicer environment, with a particular focus on its use for neurosurgical applications, fiber tracking, and functional localization.
  
 
== Faculty ==
 
== Faculty ==
*Wendy Plesniak, Ph.D.
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*[http://www.spl.harvard.edu/~wjp Wendy Plesniak, Ph.D.]
*Noby Hata, Ph. D.
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*[http://www.spl.harvard.edu/~noby Nobuhiko Hata, Ph.D.]
*Ron Kikinis, M.D.
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*[http://www.spl.harvard.edu/~kikinis Ron Kikinis, M.D.]
  
 
== Tentative Agenda  ==
 
== Tentative Agenda  ==
 
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*8:00-9:00 am Computer setup assistance by the instructors
 
*9:00-9:15 am Welcome and presentation of day activities
 
*9:00-9:15 am Welcome and presentation of day activities
*9:15-9:45 am Introduction to the NA-MIC kit for clinical research applications
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*9:15-9:45 am [[media:Kikinis-StLouis-2010-06-31.ppt|Introduction to Slicer and the Slicer community]] (Ron Kikinis)
*9:45-11:00 am Hands-on session 1: Data Loading and 3D Visualization
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*9:45-10:00 am Break and computer setup
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*10:00-11:00 am Hands-on session 1: Data Loading and 3D Visualization
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**[[media:DataLoadingAndVisualization_Slicer3.6_SoniaPujol.pdf | Visualization Tutorial]]
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**[[media:Slicer3VisualizationDataset.zip | Visualization Data]]
 
*11:00-11:15 am Coffee break
 
*11:00-11:15 am Coffee break
 
*11:15-12:30 pm Hands-on session 2: Interactive Editing
 
*11:15-12:30 pm Hands-on session 2: Interactive Editing
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**[[media:InteractiveEditorTutorial_SoniaPujol.pdf | Interactive Editing Tutorial]]
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**[[media:EditorTutorialDataset.zip | Interactive Editing Data]]
 
*12:30-1:30 pm Lunch
 
*12:30-1:30 pm Lunch
*1:30-3:15 pm Hands-on session 3: Diffusion Tensor Imaging
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*1:30-2:45 pm Hands-on session 3: Diffusion Tensor Imaging
*3:15-3:30 pm Coffee Break
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**[[media:DiffusionMRITutorial_Slicer3.6_SPujol.pdf‎ | Diffusion MRI Tutorial ]]
*3:30-4:45 pm Hands-on session 4: Neurosurgical Planning  
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**[[media:DiffusionDataset.zip| Diffusion Data]]
*4:45-5:00 pm Questions from the audience and concluding remarks
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*3:00-3:15 pm Coffee Break
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*3:15-4:30 pm Hands-on session 4: Neurosurgical Planning
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**[http://www.slicer.org/slicerWiki/images/9/9a/SlicerNeurosurgeryTutorial-3.6.ppt Neurosurgery Tutorial]
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**[http://www.slicer.org/slicerWiki/images/d/d1/Slicer-tutorial-neurosurgery.zip Data]
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*4:30-5:00 pm Questions from the audience and concluding remarks
  
 
== Logistics ==  
 
== Logistics ==  
*To enroll, please contact dmarcus@wustl.edu.
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*Enrollment is now closed. To be placed on the waitlist, please contact dmarcus@wustl.edu.
*Location of the workshop: Farrell Learning and Teaching Center [http://maps.google.com/maps/ms?hl=en&ie=UTF8&msa=0&msid=106293163593764131999.000481509a496daae6695&z=16 map]
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*Location of the workshop: Farrell Learning and Teaching Center [http://maps.google.com/maps/ms?hl=en&ie=UTF8&msa=0&msid=106293163593764131999.000481509a496daae6695&z=16 map], Room 303A&B
 
*Time: 9am - 5 pm (Lunch will be provided)
 
*Time: 9am - 5 pm (Lunch will be provided)
  
== Preparations ==
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== Preparations ==  
'''Desktop workstations will be provided or bring your own laptop with Slicer already installed.'''
 
*Hardware minimum requirement: 2GB of main memory and graphics hardware acceleration with 256 MB of dedicated graphics memory (nvidia preferred).
 
*Supported OS: Windows, Linux and Mac OS X
 
*We have just released the first release candidate for Slicer 3.6.
 
*We will post the version for downloading the software and the tutorial datasets a few days before the event.
 
  
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'''Desktop workstations will be provided or bring your own laptop with the [http://www.slicer.org/pages/Special:SlicerDownloads Slicer3.6 release version] appropriate to the platform you'll be using.'''
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*Slicer3.6 Software 
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**Windows: Slicer3-3.6-2010-06-10-win32.exe
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**Mac: Slicer3-3.6-2010-06-10-darwin-x86.tar.gz
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**Linux 64: Slicer3-3.6-2010-06-10-linux-x86_64.tar.gz
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**Linux 32: Slicer3-3.6-2010-06-10-linux-x86.tar.gz
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Hardware minimum requirement: 2GB of main memory and graphics hardware acceleration with 256 MB of dedicated graphics memory (nvidia preferred).
 +
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*Datasets: We will post the tutorial datasets a few days before the event.
  
 
This event is sponsored by the Washington Univeristy Neuroimaging Informatics and Analysis Center.
 
This event is sponsored by the Washington Univeristy Neuroimaging Informatics and Analysis Center.
  
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== Slicer3 Training Survey ==
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[http://www.surveymonkey.com/s/GZDXKXQ Click here to take the Slicer3 Training Survey] 
  
 
Back to [http://www.na-mic.org/Wiki/index.php/Events NA-MIC Events]
 
Back to [http://www.na-mic.org/Wiki/index.php/Events NA-MIC Events]

Latest revision as of 20:30, 9 August 2011

Home < 2010-Slicer-StLouis
WUSL.jpg
NAMIC.jpg Logo nac.gif NCIGTlogo.gif Catalyst logo final.jpg


Introduction

A one-day Slicer tutorial will be held at Washington University in St. Louis on July 1, 2010. The primary objective of this event is to introduce users to the Slicer environment, with a particular focus on its use for neurosurgical applications, fiber tracking, and functional localization.

Faculty

Tentative Agenda

Logistics

  • Enrollment is now closed. To be placed on the waitlist, please contact dmarcus@wustl.edu.
  • Location of the workshop: Farrell Learning and Teaching Center map, Room 303A&B
  • Time: 9am - 5 pm (Lunch will be provided)

Preparations

Desktop workstations will be provided or bring your own laptop with the Slicer3.6 release version appropriate to the platform you'll be using.

  • Slicer3.6 Software
    • Windows: Slicer3-3.6-2010-06-10-win32.exe
    • Mac: Slicer3-3.6-2010-06-10-darwin-x86.tar.gz
    • Linux 64: Slicer3-3.6-2010-06-10-linux-x86_64.tar.gz
    • Linux 32: Slicer3-3.6-2010-06-10-linux-x86.tar.gz

Hardware minimum requirement: 2GB of main memory and graphics hardware acceleration with 256 MB of dedicated graphics memory (nvidia preferred).

  • Datasets: We will post the tutorial datasets a few days before the event.

This event is sponsored by the Washington Univeristy Neuroimaging Informatics and Analysis Center.

Slicer3 Training Survey

Click here to take the Slicer3 Training Survey

Back to NA-MIC Events