Difference between revisions of "2012 Winter Project Week:DTIAFA"
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| − | Image:PW- | + | Image:PW-SLC2012.png|[[2012_Winter_Project_Week#Projects|Projects List]] |
Image:DTIAFA1.jpg|DTIAtlasFiberAnalyzer - Top Screen | Image:DTIAFA1.jpg|DTIAtlasFiberAnalyzer - Top Screen | ||
Image:DTIAFA2.jpg|DTIAtlasFiberAnalyzer - Plot Window | Image:DTIAFA2.jpg|DTIAtlasFiberAnalyzer - Plot Window | ||
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==Key Investigators== | ==Key Investigators== | ||
| − | * UNC: Jean-Baptiste Berger, | + | * UNC: Jean-Baptiste Berger, Benjamin Yvernault, Yundi Shi, Clement Vachet, Martin Styner |
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<h3>Objective</h3> | <h3>Objective</h3> | ||
| − | DTIAtlasFiberAnalyzer aims to map atlas fiber bundles to individual subjects, extract corresponding fiber profiles, gather and plot all related information (average FA map along fibers...). DTIAtlasFiberAnalyzer calls external applications, corresponding to individual steps or the | + | DTIAtlasFiberAnalyzer aims to map atlas fiber bundles to individual subjects, extract corresponding fiber profiles, gather and plot all related information (average FA map along fibers...). DTIAtlasFiberAnalyzer calls external applications, corresponding to individual steps or the framework, such as: dtitractstat, fiberprocess, and mergestatwithfiber. Once information are computed, each merged statistics on the fiber bundle can be displayed on 3D Slicer. |
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<h3>Approach, Plan</h3> | <h3>Approach, Plan</h3> | ||
| − | Our plan for the project week is to test this tool on | + | Our plan for the project week is to test this tool on small datasets and meet with interested parties. |
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<h3>Progress</h3> | <h3>Progress</h3> | ||
| − | + | * Test on two different group of subject | |
| + | * Noticing a bug on dtitractstat | ||
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Latest revision as of 15:18, 13 January 2012
Home < 2012 Winter Project Week:DTIAFA
DTIAtlasFiberAnalyzer - Top Screen
DTIAtlasFiberAnalyzer - Plot Window
Key Investigators
- UNC: Jean-Baptiste Berger, Benjamin Yvernault, Yundi Shi, Clement Vachet, Martin Styner
Objective
DTIAtlasFiberAnalyzer aims to map atlas fiber bundles to individual subjects, extract corresponding fiber profiles, gather and plot all related information (average FA map along fibers...). DTIAtlasFiberAnalyzer calls external applications, corresponding to individual steps or the framework, such as: dtitractstat, fiberprocess, and mergestatwithfiber. Once information are computed, each merged statistics on the fiber bundle can be displayed on 3D Slicer.
Approach, Plan
Our plan for the project week is to test this tool on small datasets and meet with interested parties.
Progress
- Test on two different group of subject
- Noticing a bug on dtitractstat
Delivery Mechanism
This work will be delivered to the NA-MIC Kit as a
- Slicer Module
- Extension -- commandline
- Extension -- loadable
