Difference between revisions of "2016 Winter Project Week/Projects/DICOMSegObjIntegration"

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Image:PW-MIT2016.png|link=2016_Winter_Project_Week#Projects|[[2016_Winter_Project_Week#Projects|Projects List]]
 
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Image:Segmentations.png
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Image:PW-MIT2016-BrainlabChestSegmentationsSlicer.png
 
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==Key Investigators==
 
==Key Investigators==
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* Kyle Sunderland, Queen's
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* Csaba Pinter, Queen's
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* Andras Lasso, Queen's
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* Andrey Fedorov, BWH
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* Steve Pieper, Isomics
  
 
==Project Description==
 
==Project Description==
 
{| class="wikitable"
 
{| class="wikitable"
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! style="text-align: left; width:27%" |  Objective
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! style="text-align: left; width:27%" |  Approach and Plan
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! style="text-align: left; width:27%" |  Progress and Next Steps
 
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! style="text-align: left; width:27%" |       Objective
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|
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<!-- Add a bulleted list of key points -->
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<!-- Objective bullet points -->
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*  
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* Implement a DICOM plugin that creates Segmentation Nodes using the DICOM Segmentation image import/export code.
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! style="text-align: left; width:27%" |       Approach, Plan
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<!-- Approach and Plan bullet points -->
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* DICOM SegObj import/export is already implemented.
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*  
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* The [http://wiki.slicer.org/slicerWiki/index.php/Documentation/Nightly/Modules/Segmentations Segmentations] infrastructure will soon be integrated into Slicer core.
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* Create a Python DICOM plugin to store the information from DICOM segmentations as Segmentation objects.
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! style="text-align: left; width:27%" |     Progress
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|
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<!-- Fill this out at the end of Project Week; describe what you did this week and what you plan to do next -->
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<!-- Progress and Next steps bullet points (fill out at the end of project week -->
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*
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* Importing has been updated to work with Segmentations; it is now possible to load DICOM SEG objects associated with different instances, which was/is not possible with the labelmap/editor based approach
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* Exporting of Segmentations to DICOM SEG objects is now implemented.
 
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==Background and References==
 
==Background and References==
 
<!-- Use this space for information that may help people better understand your project, like links to papers, source code, or data -->
 
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[https://github.com/Sunderlandkyl/Reporting Source Code (Reporting Fork)]
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[https://www.slicer.org/slicerWiki/index.php/Documentation/Nightly/Extensions/Reporting Reporting Extension] ([https://github.com/QIICR/Reporting Github])

Latest revision as of 15:04, 8 January 2016

Home < 2016 Winter Project Week < Projects < DICOMSegObjIntegration

Key Investigators

  • Kyle Sunderland, Queen's
  • Csaba Pinter, Queen's
  • Andras Lasso, Queen's
  • Andrey Fedorov, BWH
  • Steve Pieper, Isomics

Project Description

Objective Approach and Plan Progress and Next Steps
  • Implement a DICOM plugin that creates Segmentation Nodes using the DICOM Segmentation image import/export code.
  • DICOM SegObj import/export is already implemented.
  • The Segmentations infrastructure will soon be integrated into Slicer core.
  • Create a Python DICOM plugin to store the information from DICOM segmentations as Segmentation objects.
  • Importing has been updated to work with Segmentations; it is now possible to load DICOM SEG objects associated with different instances, which was/is not possible with the labelmap/editor based approach
  • Exporting of Segmentations to DICOM SEG objects is now implemented.

Background and References

Source Code (Reporting Fork)

Reporting Extension (Github)

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