Difference between revisions of "AHM2010:NA-MIC Kit Update"

From NAMIC Wiki
Jump to: navigation, search
Line 8: Line 8:
 
* Slicer currently uses [http://www.kitware.com/news/home/browse/ITK?2009_09_16&ITK+3.16+Released ITK 3.16]
 
* Slicer currently uses [http://www.kitware.com/news/home/browse/ITK?2009_09_16&ITK+3.16+Released ITK 3.16]
 
* [http://www.insight-journal.org/browse/publication/149 Label image classes], [http://hdl.handle.net/1926/584 Label map classes], Label map morphology
 
* [http://www.insight-journal.org/browse/publication/149 Label image classes], [http://hdl.handle.net/1926/584 Label map classes], Label map morphology
 +
* [http://hdl.handle.net/10380/3055 Region based Level Sets]
 
* Improvements in Streaming large images
 
* Improvements in Streaming large images
 
* QuadEdgeMesh spherical registration
 
* QuadEdgeMesh spherical registration
Line 13: Line 14:
 
** Deformable (Diffeomorphic Demons) (in NAMIC Sandbox)
 
** Deformable (Diffeomorphic Demons) (in NAMIC Sandbox)
 
** Improvements in the QuadEdgeMesh filter class (in ITK to support the two above).
 
** Improvements in the QuadEdgeMesh filter class (in ITK to support the two above).
* [http://hdl.handle.net/10380/3055 Region based Level Sets]
 
 
* Pixel coordinates consistency
 
* Pixel coordinates consistency
* Multi-threaded registration framework
+
* Multi-threaded registration framework (fixes)
 
** multi-threaded metrics
 
** multi-threaded metrics
 
** thread-safe transforms
 
** thread-safe transforms

Revision as of 13:31, 4 January 2010

Home < AHM2010:NA-MIC Kit Update
Back to AHM 2010

Goals

Information about NA-MIC Kit component developments over the past year so that developers will have an idea of what new features are available for their use.

ITK

VTK

Teem

XNAT

  • XNAT 1.4 RC3 available
    • More robust QC modeling via xnat:qcManualAssessorData.
    • New 'columns' variable for REST based listings.
    • LDAP support.
    • Improved memory footprint and efficiency.
    • Refactored Search UI in the listing engine.
  • xnatfs provides WebDav access to XNAT instances


GWE

  • Interactive experiments' results browser.
  • CSV and generated commands dumps and preview.
  • Support for LSF and Lava cluster DRMs.
  • Ability to override auto-discovered DRMs with configured ones.
  • Ability to override default database installation location.
  • Function to extract experiments' parameters from text files.
  • Operations to delete, pause and resume experiments.
  • Recommended to watch: 5 minutes demo video.

BatchMake

  • Improvement in the integration of grid computing using condor.
  • Semi-Automatic conversion of Slicer modules for batch processing
  • Parameter exploration is now possible
  • Execution of algorithms are faster

CMake/CPack/CTest/CDash

  • parallel ctest (ctest -j)
  • cpack
  • conversion to cmake in-progress
  • linkage between CTest and MIDAS in progress
    • Host large datasets for algorithm validation and performance testing
      • Demonstrated using RegisterImages

3D Slicer

  • List of new modules and features (TBD)
  • 3.4/3.4.1 release information
  • Extension Architecture and Extension Modules
  • ARRA Supplement Projects
  • Qt Port (lead in to Julien's 8:30 session)
    • Co-existence of KWWidgets and Qt
    • Creation of a subset of the needed Qt widgets
    • Full port in Qt of first modules
    • Design of the core architecture in Qt (plugin mechanism, Command line modules, widget libraries...)
    • Tutorials for the slicer developer community to port modules
    • Gallery and Tutorials
  • More info on the Slicer wiki News Page
  • multi-camera view in Slicer (endoscopy application)

Other Topics