Difference between revisions of "AHM 2008"

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__NOTOC__
 
__NOTOC__
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Back to [[Events]]
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== Introduction ==
 
== Introduction ==
 
 
  
 
{| border="00" cellpadding="8" cellspacing="0"
 
{| border="00" cellpadding="8" cellspacing="0"
 
|-
 
|-
| rowspan="2"| NA-MIC participants meet for a all-hands meeting (AHM) once a year. The purpose of the AHM is to coordinate, discuss plans and report to NIH officers and the external advisory board (EAB). The external advisory board meets with the NA-MIC leadership immediately after the AHM. In parallel, NA-MIC is organizing a project week. These events, with the exception of the EAB meeting, are open to collaborators and potential collaborators.
+
| rowspan="2"| '''This is the home page for the 2008 NA-MIC all hands meeting (AHM).''' NA-MIC participants meet for a AHM once a year. The purpose of the AHM is to coordinate, discuss plans and report to NIH officers and the external advisory board (EAB). The external advisory board meets with the NA-MIC leadership immediately after the AHM. In parallel, NA-MIC is organizing a project week. These events, with the exception of the EAB meeting, are open to collaborators and potential collaborators.
  
 
For more information about the project weeks in general, click [[Engineering:Programming_Events|'''here''']].  
 
For more information about the project weeks in general, click [[Engineering:Programming_Events|'''here''']].  
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| style="background: #ebeced" colspan="2" align="center"| [[Image:SLC.jpg|center|350px|View of the City]]
 
| style="background: #ebeced" colspan="2" align="center"| [[Image:SLC.jpg|center|350px|View of the City]]
 
|-
 
|-
| style="background: #ebeced"| <b>SLC</b>
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| style="background: #ebeced"|The 2008 AHM, EAB and Project Week was held in Salt Lake City, UT, January 7-11, 2008.  
| style="background: #ebeced"|The combined AHM, EAB and Project Week will be held in Salt Lake City, UT, January 7-11 2008.  
 
 
|}
 
|}
 
<br />
 
<br />
 
== Dates. Venue. Registration ==
 
 
'''Dates:'''
 
* The All Hands Meeting and External Advisory Board Meeting will be held on '''Thursday, January 10th'''. 
 
* Project Activities will be held rest of the week between '''Monday, January 7th and Friday, January 11th'''.
 
 
'''Venue:''' The venue for the meeting is [http://www.marriott.com/hotels/travel/slccc-salt-lake-city-marriott-city-center/ Marriot City Center, Salt Lake City, Utah] Mariott City Center, Salt Lake City, Utah. [http://marriott.com/property/meetingsandevents/floorplans/slccc (Floorplan)]. To reserve rooms at the meeting rate of $129/night, please either call the hotel at 1-801-961-8700 or 1-866-961-8700 (toll free) and mention that you are attending the NAMIC meeting or book online by using the code SCISCIA. Please note that we do need attendees to use this hotel in order to not incur additional charges for the use of conference rooms.
 
 
<big> '''Registration:''' We are charging a registration fee to all participants. The fee covers the costs of the facilities and food provided. In order to keep the fee low, we need to get a sufficient number of hotel nights by our participants. See above for more on this. Please click [http://www.sci.utah.edu/namic2008/registration.html '''here'''] for online registration. This registration must be completed by Friday, December 14, 2007. </big>
 
  
 
== Agenda ==
 
== Agenda ==
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|-
 
|-
 
| style="background:#ffffdd; color:black"|
 
| style="background:#ffffdd; color:black"|
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] '''
+
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol B-C]
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] '''
+
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol B-C]
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] '''
+
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol B-C]
| style="background:#fff6a6; color:#522200"| '''AHM, [[2008_EAB|EAB]]'''
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| style="background:#fff6a6; color:#522200"| '''AHM''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol A-B], [[2008_EAB|'''EAB''']] in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Olympus B]
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] '''
+
'''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Olympus A]
 +
| style="background:#b4d597; color:#522200"|'''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol B-C]
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''7:30-'''  
 
| style="background:#ffffdd; color:black"|'''7:30-'''  
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|-
 
|-
 
| style="background:#ffffdd; color:black"|'''8:00-10:00'''  
 
| style="background:#ffffdd; color:black"|'''8:00-10:00'''  
| style="background:#ebeced; color:black"|
+
| style="background:#ebeced; color:black"|'''9:30''' Core 1 and 2 PI closed session in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol A]
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Plug-ins for Slicer3|Plug-ins for Slicer3]]
+
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Plug-ins for Slicer3|Plug-ins for Slicer3]] in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
| style="background:#b4d597; color:black"|Project Work <br>'''8:00-9:00''' [[2008 Winter Project Week IGT|IGT Breakout Session]]<br>
+
| style="background:#b4d597; color:black"|Project Work <br>'''8:00-9:00''' [[2008 Winter Project Week IGT|IGT Breakout Session]] [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
9am: [[2008 Winter Project Week Tractography|Tractography Breakout Session]]  
+
<br>
| style="background:#fff6a6; color:black"|
+
9am: [[2008 Winter Project Week Tractography|Tractography Breakout Session]] in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 2]
'''8:00''' Introduction, Ron Kikinis <br>
+
| style="background:#fff6a6; color:black"|<br>
 +
'''8:00''' [[AHM 2008 Introduction|Introduction]], Ron Kikinis <br>
  
 
'''Core 1 and 2 Presentations'''<br>
 
'''Core 1 and 2 Presentations'''<br>
'''8:05''' Utah 1, Ross Whitaker<br>
+
'''8:05''' [[Media:NAMIC-AHM2008-Utah1.ppt | Utah 1]], Ross Whitaker<br>
'''8:20''' Utah 2, Guido Gerig<br>
+
'''8:20''' [[Media:Utah-Gerig-EAB.ppt‎ | Utah 2]], Guido Gerig<br>
'''8:30''': MIT, Polina Golland<br>
+
'''8:30''': [[Media:MIT_NAMIC_AHM2008.ppt‎ | MIT]], Polina Golland<br>
'''8:45''': Georgia Tech, Allen Tannenbaum<br>
+
'''8:45''': [[Media:20080110-AHM-GeorgiaTech.zip|Georgia Tech]], Allen Tannenbaum<br>
'''9:00''': UNC, Martin Styner<br>
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'''9:00''': [[Media:2008 UNC Core1 NAMIC AHM.ppt | UNC]], Martin Styner<br>
'''9:10''': MGH/WUSTL, Dan Marcus<br>
+
'''9:10''': [[Media:namic_ahm_nrg.ppt | MGH/WUSTL]], Dan Marcus<br>
'''9:25''': Kitware, Will Schroeder<br>
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'''9:25''': [[media:2008_NA-MIC_AHM_Kitware.ppt | Kitware]], Will Schroeder<br>
'''9:40''': GE Research, Jim Miller
+
'''9:40''': [[Media:GE Research AHM 2008.ZIP | GE Research]], Jim Miller
| style="background:#b4d597; color:black"|Project Work
+
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Python|Python mini-Breakout Session]]
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''10:00-10:30'''  
 
| style="background:#ffffdd; color:black"|'''10:00-10:30'''  
| style="background:#ebeced; color:black"|  
+
| style="background:#ebeced; color:black"| Core 1 and 2 PI closed session
 
| style="background:#b4d597; color:black"| Coffee
 
| style="background:#b4d597; color:black"| Coffee
 
| style="background:#b4d597; color:black"| Coffee
 
| style="background:#b4d597; color:black"| Coffee
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|-
 
|-
 
| style="background:#ffffdd; color:black"|'''10:30-12:00'''  
 
| style="background:#ffffdd; color:black"|'''10:30-12:00'''  
| style="background:#ebeced; color:black"|
+
| style="background:#ebeced; color:black"| Core 1 and 2 PI closed session
 
| style="background:#b4d597; color:black"|Project Work  
 
| style="background:#b4d597; color:black"|Project Work  
 
| style="background:#b4d597; color:black"|Project Work <br>
 
| style="background:#b4d597; color:black"|Project Work <br>
 
[[2008 Winter Project Week Tractography|Tractography Breakout Session contd]]   
 
[[2008 Winter Project Week Tractography|Tractography Breakout Session contd]]   
 
| style="background:#fff6a6; color:black"|
 
| style="background:#fff6a6; color:black"|
'''10:30''': Isomics, Steve Pieper<br>
+
'''10:30''': [[media:2008 NA-MIC AHM Isomics.ppt | Isomics]], Steve Pieper<br>
'''10:45''': UCSD, Mark Ellisman<br>
+
'''10:45''': [[media:NA-MIC_2008AHM_UCSD.ppt | UCSD]], Mark Ellisman<br>
'''11:00''': UCLA, Arthur Toga<br>
+
'''11:00''': [[media:Toga NAMIC 2008.zip|UCLA]], Arthur Toga<br>
'''11:15''': Outreach, Randy Gollub<br>
+
'''11:15''': Outreach: [[media:NA-MIC.2008.AHM.Core5.6.ppt|Training & Dissemination]], Randy Gollub<br>
'''11:25''': Invited speaker: Mike Sherman, Stanford NCBC Simbios, SimTK Architect
+
'''11:25''': Invited [[media:Simbios-AHM-2008.zip|talk]]: Mike Sherman, Stanford NCBC Simbios, SimTK Architect
 
| style="background:#b4d597; color:black"|Project Work
 
| style="background:#b4d597; color:black"|Project Work
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''12:00-1:00'''   
 
| style="background:#ffffdd; color:black"|'''12:00-1:00'''   
| style="background:#b4d597; color:black"| Lunch
 
| style="background:#b4d597; color:black"| Lunch
 
 
| style="background:#b4d597; color:black"| Lunch
 
| style="background:#b4d597; color:black"| Lunch
 +
| style="background:#b4d597; color:black"| Lunch <br> [[DBP Engineering Resource|DPB Engineers Lunch meeting]]
 +
| style="background:#b4d597; color:black"| Lunch<br> [[AHM 2008 fMRI|Birds of a Feather: fMRI]]
 
| style="background:#fff6a6; color:black"| Lunch
 
| style="background:#fff6a6; color:black"| Lunch
 
| style="background:#b4d597; color:black"| Adjourn  
 
| style="background:#b4d597; color:black"| Adjourn  
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| style="background:#ffffdd; color:black"|'''1:00-3:00'''  
 
| style="background:#ffffdd; color:black"|'''1:00-3:00'''  
 
| style="background:#b4d597; color:black"|Introduce Projects and Participants  
 
| style="background:#b4d597; color:black"|Introduce Projects and Participants  
| style="background:#b4d597; color:black"|Breakout: [[2008 Winter Project Week Geometry and Topology processing of Meshes|Geometry and Topology processing of Meshes]]
+
| style="background:#b4d597; color:black"|Breakout: [[2008 Winter Project Week Geometry and Topology processing of Meshes|Geometry and Topology processing of Meshes]] [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amthyst 1]
 
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Tractography|Tractography Breakout Session contd]]  
 
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Tractography|Tractography Breakout Session contd]]  
 
| style="background:#fff6a6; color:black"|
 
| style="background:#fff6a6; color:black"|
 
'''DBP results''' <br>
 
'''DBP results''' <br>
'''1:00''': Queens/JHU, Gabor Fichtinger<br>
+
'''1:00''': [[Media:DBP2-Prostate-AHM2008.ppt | Queens/JHU]][[Media:DBP2-Prostate-AHM2008.pdf | (pdf)]], David Gobbi<br>
'''1:15''':UNC, Heather Cody Hazlett<br>
+
'''1:15''':[[Media:UNC DBP 2_longitudinal autism study_AHM jan08.ppt| UNC]], Heather Cody Hazlett<br>
'''1:30''':Harvard, Marek Kubicki<br>
+
'''1:30''':[[Media:NA-MIC_Kubicki.ppt | Harvard]], Marek Kubicki<br>
'''1:45''':MIND/UNM, Jeremy Bockholt<br>
+
'''1:45''':[[Media:DBP2_MIND_Lupus_200801_update.ppt | MIND/UNM]], Jeremy Bockholt<br>
  
 
'''NCBC Collaborations'''<br>
 
'''NCBC Collaborations'''<br>
'''2:00''': Georgetown, Kevin Cleary<br>
+
'''2:00''': [[Media:NA-MIC_Cleary_RF_Ablation_Georgetown.pdf|Georgetown]], Kevin Cleary<br>
'''2:15''': Wakeforest, Chris Wyatt<br>
+
'''2:15''': [[Media:External-Wyatt-WFUSM.ppt‎|Wake Forest/VT]], Chris Wyatt<br>
'''2:30''': UIowa, Nicole Grosland,Vincent Magnotta<br>
+
'''2:30''': [[Media:NA-MIC Mesh Collaboration - 2008.ppt| UIowa]], Nicole Grosland,Vincent Magnotta<br>
 
| style="background:#ebeced; color:black"|
 
| style="background:#ebeced; color:black"|
 
|-
 
|-
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|-
 
|-
 
| style="background:#ffffdd; color:black"|'''3:00-5:00'''  
 
| style="background:#ffffdd; color:black"|'''3:00-5:00'''  
| style="background:#b4d597; color:black"|'''3:00-4:00''' Slicer Update <br>
+
| style="background:#b4d597; color:black"|'''3:00-4:00''' Slicer Update [[Media:2008 NA-MIC AHM Slicer3.ppt | Slides]]<br>
'''4:00-5:00''' Breakout: [[2008 Winter Project Week EM Segmenter User Group|EM Segmenter User Group]]
+
'''4:00-5:00''' Breakout: [[2008 Winter Project Week EM Segmenter User Group|EM Segmenter User Group]] [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
| style="background:#b4d597; color:black"|Project Work <br>[[2008_Winter_Project_Week_Image_Registration_Update| Registration Breakout]]
+
| style="background:#b4d597; color:black"|Project Work <br>[[2008_Winter_Project_Week_Image_Registration_Update| Registration Breakout]] [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
| style="background:#b4d597; color:black"|Project Work <br>'''3:00-4:00''' [[2008 Winter Project Week Batchmake Update|Batchmake Update]]<br>
+
| style="background:#b4d597; color:black"|Project Work <br>'''3:00-4:00''' [[2008 Winter Project Week Batchmake Update|Batchmake Update]]<br>[http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
 
[[2008 Winter Project Week Tractography|Tractography Breakout Session contd]] <br>
 
[[2008 Winter Project Week Tractography|Tractography Breakout Session contd]] <br>
 
+
| style="background:#fff6a6; color:black"|[[2008 EAB|EAB]]<br>[http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Olympus B]<br>'''3:00-4:00''' Discussion with NA-MIC Leadership<br> '''4:00-5:00''' Closed Session
| style="background:#fff6a6; color:black"|[[2008 EAB|EAB]]<br>'''3:00-4:00''' Discussion with NA-MIC Leadership<br> '''4:00-5:00''' Closed Session
 
 
| style="background:#ebeced; color:black"|
 
| style="background:#ebeced; color:black"|
 
|-
 
|-
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| style="background:#b4d597; color:black"|
 
| style="background:#b4d597; color:black"|
 
| style="background:#b4d597; color:black"|
 
| style="background:#b4d597; color:black"|
| style="background:#b4d597; color:black"|
+
| style="background:#b4d597; color:black"|'''5:00''' Optional: [[2008-SCI-tour|Tour]] of the new SCI building
 
| style="background:#fff6a6; color:black"|'''6:00''' Optional: [http://www.skisaltlake.com/murphys.htm Beer at Murphy's] (like last year)
 
| style="background:#fff6a6; color:black"|'''6:00''' Optional: [http://www.skisaltlake.com/murphys.htm Beer at Murphy's] (like last year)
 
| style="background:#ebeced; color:black"|  
 
| style="background:#ebeced; color:black"|  
 
|}
 
|}
  
Please note that there will be a Core 1&2 Site PI Retreat starting the afternoon of Sunday, January 6 and continuing on Monday, January 7th. This is a closed session for Core 1&2 Site PIs, with no delegates. The topic is the competitive renewal. (It is expected that the NIH IC Directors will make decisions about the competitive renewal mechanics in mid December, at which point we will let everybody know.)
+
Please note that there will be a Core 1&2 Site PI Retreat on the morning of Monday, January 7th. This is a closed session for Core 1&2 Site PIs, with no delegates. The topic is the competitive renewal.
 +
 
 +
== Dates. Venue. Registration ==
 +
 
 +
'''Dates:'''
 +
* The All Hands Meeting and External Advisory Board Meeting will be held on '''Thursday, January 10th'''. 
 +
* Project Activities will be held rest of the week between '''Monday, January 7th and Friday, January 11th'''.
 +
 
 +
'''Venue:''' The venue for the meeting is [http://www.marriott.com/hotels/travel/slccc-salt-lake-city-marriott-city-center/ Marriot City Center, Salt Lake City, Utah] Mariott City Center, Salt Lake City, Utah. [http://marriott.com/property/meetingsandevents/floorplans/slccc (Floorplan)]. To reserve rooms at the meeting rate of $129/night, please either call the hotel at 1-801-961-8700 or 1-866-961-8700 (toll free) and mention that you are attending the NAMIC meeting or book online by using the code SCISCIA. Please note that we do need attendees to use this hotel in order to not incur additional charges for the use of conference rooms.
 +
 
 +
'''Registration:''' We are charging a registration fee to all participants. The fee covers the costs of the facilities and food provided. In order to keep the fee low, we need to get a sufficient number of hotel nights by our participants. See above for more on this. Please click [http://www.sci.utah.edu/namic2008/registration.html '''here'''] for online registration. This registration must be completed by Friday, December 14, 2007.
 +
 
 +
'''Connectivity'''
 +
We have three wireless access points at the AHM. Two of them are located in the capital ballroom.  One is named capital-ballroom, the other is named capital-ballroom2.  If one access point doesn't let you connect it is probably overloaded.  In that case, please try connecting to the other one.
  
 
== Attendees ==
 
== Attendees ==
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Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow [http://www.sci.utah.edu/namic2008/registration.html this registration link] to complete your online registration.  The organizers will periodically publish the list of registered attendees in the space below.  Attendees should '''NOT''' add their names in this section.
 
Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow [http://www.sci.utah.edu/namic2008/registration.html this registration link] to complete your online registration.  The organizers will periodically publish the list of registered attendees in the space below.  Attendees should '''NOT''' add their names in this section.
  
This is the list of attendees who have registered as of Dec 19 2007
+
This is the list of attendees who have registered as of January 5, 2008
  
 
===AHM===
 
===AHM===
# Michael J. Ackerman, Ph.D. National Library of Medicine NIH Lead Science Officer
+
# Michael J. Ackerman, Ph.D. National Library of Medicine
 +
# Everette Burdette Acoustic MedSystems, Inc.
 
# German Cavelier NIHNIMH
 
# German Cavelier NIHNIMH
 
# Kevin Cleary Georgetown University collaborator
 
# Kevin Cleary Georgetown University collaborator
# Zohara Cohen National Institutes of Health NIH Program Officer
+
# Zohara Cohen National Institutes of Health
# Jack Collins SAIC-Frederick, Inc. collaborator
+
# Jack Collins SAIC-Frederick, Inc.
 
# Gabor Fichtinger Queens University
 
# Gabor Fichtinger Queens University
# Polina Golland MIT Core 1
+
# Chris Johnson External Advisory Board EAB member
# Randy Gollub MGH Department of Psychiatry Core 5
+
# Danial Lashkari MIT MIT
# Heather Cody hazlett University of North Carolina DBP Core2
+
# Mikhail Milchenko Washington University at St Louis 2
# Chris Johnson SCI Institute EAB
+
# Sandy Napel Stanford EAB member
# Marek Kubicki BWH Core 3
+
# Godfrey Pearlson Yale EAB member
# Danial Lashkari MIT Core 1
+
# Fred Prior External Advisory Board EAB member
# Sandy Napel Stanford EAB
 
# Godfrey Pearlson Yale EAB
 
# Fred Prior EAB
 
# Yogesh Rathi BWH Core 3
 
 
# Mike Sherman Stanford Invited Speaker
 
# Mike Sherman Stanford Invited Speaker
# Arthur Toga Laboratory of Neuro Imaging, UCLA Core 2
+
# Arthur Toga Laboratory of Neuro Imaging, UCLA
 
# Chris Wyatt Virginia Tech Collaborator
 
# Chris Wyatt Virginia Tech Collaborator
# Terry S. Yoo National Library of Medicine NIH Science Officer
+
# Terry S. Yoo National Library of Medicine
  
 
===AHM and Project Event===
 
===AHM and Project Event===
 +
# Douglas Alan Harvard University IIC Collaborator
 +
# Luca Antiga Mario Negri Institute
 
# Kevin Archie Washington University School of Medicine
 
# Kevin Archie Washington University School of Medicine
# Preston Tom Fletcher SCI Institute core 1
+
# Nicole Aucoin Brigham and Women's Hospital 2
# James V Miller GE Global Research Core 2
+
# Stephen Aylward Kitware, Inc.
# Vandana Mohan Georgia Inst of Technology 1
+
# Serdar Balci MIT
# Douglas Alan Harvard University IIC Collaborator
+
# Sebastien Barre Kitware, Inc.
# Luca Antiga Mario Negri Institute collaborator
+
# Jack Blevins Acoustic MedSystems, Inc.
# Nicole Aucoin BWH core 2
+
# Daniel Blezek Mayo Clinic External
# Stephen Aylward Kitware, Inc. collaborator
 
# serdar balci MIT core 1
 
# Sebastien Barre Kitware, Inc. core 2
 
 
# H Jeremy Bockholt The MIND Research Network MIND DBP2
 
# H Jeremy Bockholt The MIND Research Network MIND DBP2
 
# Sylvain Bouix Brigham and Womens Hospital Psychiatry Neuroimaging Lab Core 3
 
# Sylvain Bouix Brigham and Womens Hospital Psychiatry Neuroimaging Lab Core 3
# Francois Budin BWH Core 3
+
# Francois Budin Brigham and Womens Hospital
 
# Patrick Cheng Georgetown University collaborator
 
# Patrick Cheng Georgetown University collaborator
# Kiyoyuki Chinzei AIST, Japan collaborator
+
# Kiyoyuki Chinzei AIST, Japan
# NIKOS CHRISOCHOIDES COLLEGE OF WILLIAM AND MARY collaborator
+
# Nikos Chrisochoides College of William and Mary
# Csaba Csoma Johns Hopkins University collaborator
+
# Csaba Csoma Johns Hopkins University
# Brad Davis Kitware, Inc. Core 2
+
# Brad Davis Kitware, Inc.
# Andreas Freudling BWH collaborator
+
# Preston Tom Fletcher SCI Institute
# Yi Gao Georgia Tech Core 1
+
# Andreas Freudling Brigham and Women's Hospital Leadership Core
# Guido Gerig SCI Institute Core 1
+
# Yi Gao Georgia Tech
 +
# Guido Gerig SCI Institute
 
# David Gobbi Queens University DBP2
 
# David Gobbi Queens University DBP2
# Casey Goodlett SCI Institute Core 1
+
# Polina Golland MIT Core 1
# Alexandre Gouaillard Caltech collaborator
+
# Randy Gollub MGH Department of Psychiatry Core 5
# Sylvain Gouttard SCI Institute core 1
+
# Casey Goodlett SCI Institute
# Benjamin Grauer BWH Leadership Core  
+
# Alexandre Gouaillard Caltech
# Nicole Grosland The University of Iowa, CCAD Core 3
+
# Sylvain Gouttard SCI Institute
# Nathan Hageman UCLA Core 2
+
# Benjamin Grauer Brigham and Women's Hospital Leadership Core  
# Michael Halle BWH collaborator
+
# Jeffrey Grethe UCSD 2
# Kathryn Hayes Brigham and Womens Hospital core 2
+
# Nicole Grosland The University of Iowa, CCAD
# Bill Hoffman Kitware, Inc. Core 2
+
# Nathan Hageman UCLA
# Jaesung Hong Kyushu University collaborator
+
# Michael Halle Brigham and Women's Hospital Leadership Core
# Luis Ibanez Kitware, Inc. Core 2
+
# Nobuhiko Hata Brigham and Women's Hospital Leadership Core
# Julien Jomier Kitware, Inc. Core 2
+
# Nobuhiko Hata Brigham and Women's Hospital
 +
# Kathryn Hayes Brigham and Womens Hospital 2 - Engineering
 +
# Heather Cody Hazlett University of North Carolina DBP Core2
 +
# Bill Hoffman Kitware, Inc.
 +
# Jaesung Hong Kyushu University
 +
# Luis Ibanez Kitware, Inc.
 +
# Mustafa Okan Irfanoglu OSU
 +
# Firdaus Janoos ohio-state univ
 +
# Julien Jomier Kitware, Inc.
 +
# Usman Khan Brigham and Womens Hospital
 
# Ron Kikinis Brigham and Womens Hospital Leadership Core
 
# Ron Kikinis Brigham and Womens Hospital Leadership Core
# Curtis Lisle KnowledgeVis, LLC Core 2
+
# Marek Kubicki Brigham and Womens Hospital
# Haiying Liu Brigham and Womens Hospital collaborator
+
# Curtis Lisle KnowledgeVis, LLC 2
# William Lorensen EAB
+
# Haiying Liu Brigham and Womens Hospital
# raghu machiraju The Ohio State University collaborator
+
# William Lorensen External Advisory Board EAB
# Vincent Magnotta The University of Iowa, CCAD collaborator
+
# Raghu Machiraju The Ohio State University
 +
# Vincent Magnotta The University of Iowa, CCAD
 
# Daniel Marcus Washington University Core 2
 
# Daniel Marcus Washington University Core 2
# Doug Markant BWH core 3
+
# Doug Markant Brigham and Women's Hospital Leadership Core
# Katie Mastrogiacomo SPL, BWH Leadership Core
+
# Katie Mastrogiacomo SPL, Brigham and Women's Hospital Leadership Core
# Sean Megason Caltech collaborator
+
# Sean Megason Caltech
# John Melonakos Georgia Tech Core 1
+
# John Melonakos Georgia Tech
# Kishore Mosaliganti The Ohio State University collaborator
+
# James V Miller GE Global Research
# Tri Ngo MIT Core 1
+
# Vandana Mohan Georgia Inst of Technology 1
# Ipek Oguz UNC Core 1
+
# Kishore Mosaliganti The Ohio State University
# Steve Pieper Isomics, Inc. Core 2, 6
+
# Tri Ngo MIT
# carlo pierpaoli NIH EAB
+
# Ipek Oguz UNC 2
# Wendy Plesniak BWH collaborator
+
# Steve Pieper Isomics, Inc. 2, 6
# Kilian Pohl BWH Core 1
+
# Carlo Pierpaoli NIH
# Marcel Prastawa SCI Institute core 1
+
# Wendy Plesniak Brigham and Women's Hospital Leadership Core
# Sonia Pujol BWH core 5
+
# Kilian Pohl Brigham and Women's Hospital 1
# Katharina Quintus BWH core 3
+
# Marcel Prastawa SCI Institute
# Mert Sabuncu MIT Core 1
+
# Sonia Pujol Brigham and Women's Hospital Leadership Core
# Raul San Jose BWH collaborator
+
# Katharina Quintus Brigham and Women's Hospital Leadership Core
# Will Schroeder Kitware, Inc. Core 2
+
# Yogesh Rathi Brigham and Womens Hospital
# Mark Scully The MIND Research Network Core 3
+
# Mert Sabuncu MIT
# Kiran Shivanna The University of Iowa, CCAD collaborator
+
# Will Schroeder Kitware, Inc.
# Martin Styner UNC Chapel Hill Core 1
+
# Mark Scully The MIND Research Network
# Padma Sundaram Brigham and Womens collaborator
+
# Li Shen Indiana University
# Xiaodong Tao GE Core 2
+
# Kiran Shivanna The University of Iowa, CCAD
# Kinh Tieu BWH collaborator
+
# Martin Styner UNC Chapel Hill 1
# Junichi Tokuda BWH collaborator
+
# Padma Sundaram Brigham and Womens Hospital Brigham and Womens
# Clement Vachet UNC Chapel Hill Core 3
+
# Xiaodong Tao GE
# Koen Van Leemput MIT Core 1
+
# Kinh Tieu Brigham and Women's Hospital
# Carl-Fredrik Westin Brigham and Womens Hospital collaborator
+
# Junichi Tokuda Brigham and Women's Hospital Leadership Core
# Nathan Wilson Cardiovascular Simulation, Inc. collaborator
+
# Clement Vachet UNC Chapel Hill 3
# Alexander Yarmarkovich BWH Core 2
+
# Koen Van Leemput MIT
# Boon Thye Yeo MIT Core 1
+
# Sandy Wells Brigham and Womens Hospital
 
+
# Carl-Fredrik Westin Brigham and Womens Hospital NAC
 
+
# Nathan Wilson Cardiovascular Simulation, Inc.
 
+
# Alexander Yarmarkovich Isomics, Inc. Engineering Core 2
 +
# Anastasia Yendiki MGH
 +
# Boon Thye Yeo MIT
 +
# Tim Yin Stony Brook University
  
This is the list of attendees who have registered as of Dec 17 2007. Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow [http://www.sci.utah.edu/namic2008/registration.html this registration link] to complete your online registration.  The organizers will periodically publish the list of registered attendees in the space above.  Attendees should '''NOT''' add their names in this section.
+
This is the list of attendees who have registered as of January 5, 2008. Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow [http://www.sci.utah.edu/namic2008/registration.html this registration link] to complete your online registration.  The organizers will periodically publish the list of registered attendees in the space above.  Attendees should '''NOT''' add their names in this section.

Latest revision as of 15:40, 9 December 2016

Home < AHM 2008

Back to Events

Introduction

This is the home page for the 2008 NA-MIC all hands meeting (AHM). NA-MIC participants meet for a AHM once a year. The purpose of the AHM is to coordinate, discuss plans and report to NIH officers and the external advisory board (EAB). The external advisory board meets with the NA-MIC leadership immediately after the AHM. In parallel, NA-MIC is organizing a project week. These events, with the exception of the EAB meeting, are open to collaborators and potential collaborators.

For more information about the project weeks in general, click here.

For information about the January 2008 project week, see below or click here.

For information about Utah as a travel destination click here.

View of the City
The 2008 AHM, EAB and Project Week was held in Salt Lake City, UT, January 7-11, 2008.


Agenda

Time Monday, January 7 Tuesday, January 8 Wednesday, January 9 Thursday, January 10 Friday, January 11
Project Activities in Capitol B-C Project Activities in Capitol B-C Project Activities in Capitol B-C AHM in Capitol A-B, EAB in Olympus B

Project Activities in Olympus A

Project Activities in Capitol B-C
7:30- Breakfast Breakfast Breakfast Breakfast
8:00-10:00 9:30 Core 1 and 2 PI closed session in Capitol A Project Work
Plug-ins for Slicer3 in Amethyst 1
Project Work
8:00-9:00 IGT Breakout Session Amethyst 1


9am: Tractography Breakout Session in Amethyst 2


8:00 Introduction, Ron Kikinis

Core 1 and 2 Presentations
8:05 Utah 1, Ross Whitaker
8:20 Utah 2, Guido Gerig
8:30: MIT, Polina Golland
8:45: Georgia Tech, Allen Tannenbaum
9:00: UNC, Martin Styner
9:10: MGH/WUSTL, Dan Marcus
9:25: Kitware, Will Schroeder
9:40: GE Research, Jim Miller

Project Work
Python mini-Breakout Session
10:00-10:30 Core 1 and 2 PI closed session Coffee Coffee Coffee Coffee
10:30-12:00 Core 1 and 2 PI closed session Project Work Project Work

Tractography Breakout Session contd

10:30: Isomics, Steve Pieper
10:45: UCSD, Mark Ellisman
11:00: UCLA, Arthur Toga
11:15: Outreach: Training & Dissemination, Randy Gollub
11:25: Invited talk: Mike Sherman, Stanford NCBC Simbios, SimTK Architect

Project Work
12:00-1:00 Lunch Lunch
DPB Engineers Lunch meeting
Lunch
Birds of a Feather: fMRI
Lunch Adjourn
1:00-3:00 Introduce Projects and Participants Breakout: Geometry and Topology processing of Meshes Amthyst 1 Project Work
Tractography Breakout Session contd

DBP results
1:00: Queens/JHU (pdf), David Gobbi
1:15: UNC, Heather Cody Hazlett
1:30: Harvard, Marek Kubicki
1:45: MIND/UNM, Jeremy Bockholt

NCBC Collaborations
2:00: Georgetown, Kevin Cleary
2:15: Wake Forest/VT, Chris Wyatt
2:30: UIowa, Nicole Grosland,Vincent Magnotta

3:30-4:00 Coffee Coffee Coffee Coffee
3:00-5:00 3:00-4:00 Slicer Update Slides

4:00-5:00 Breakout: EM Segmenter User Group Amethyst 1

Project Work
Registration Breakout Amethyst 1
Project Work
3:00-4:00 Batchmake Update
Amethyst 1

Tractography Breakout Session contd

EAB
Olympus B
3:00-4:00 Discussion with NA-MIC Leadership
4:00-5:00 Closed Session
05:00-07:00 5:00 Optional: Tour of the new SCI building 6:00 Optional: Beer at Murphy's (like last year)

Please note that there will be a Core 1&2 Site PI Retreat on the morning of Monday, January 7th. This is a closed session for Core 1&2 Site PIs, with no delegates. The topic is the competitive renewal.

Dates. Venue. Registration

Dates:

  • The All Hands Meeting and External Advisory Board Meeting will be held on Thursday, January 10th.
  • Project Activities will be held rest of the week between Monday, January 7th and Friday, January 11th.

Venue: The venue for the meeting is Marriot City Center, Salt Lake City, Utah Mariott City Center, Salt Lake City, Utah. (Floorplan). To reserve rooms at the meeting rate of $129/night, please either call the hotel at 1-801-961-8700 or 1-866-961-8700 (toll free) and mention that you are attending the NAMIC meeting or book online by using the code SCISCIA. Please note that we do need attendees to use this hotel in order to not incur additional charges for the use of conference rooms.

Registration: We are charging a registration fee to all participants. The fee covers the costs of the facilities and food provided. In order to keep the fee low, we need to get a sufficient number of hotel nights by our participants. See above for more on this. Please click here for online registration. This registration must be completed by Friday, December 14, 2007.

Connectivity We have three wireless access points at the AHM. Two of them are located in the capital ballroom. One is named capital-ballroom, the other is named capital-ballroom2. If one access point doesn't let you connect it is probably overloaded. In that case, please try connecting to the other one.

Attendees

Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow this registration link to complete your online registration. The organizers will periodically publish the list of registered attendees in the space below. Attendees should NOT add their names in this section.

This is the list of attendees who have registered as of January 5, 2008

AHM

  1. Michael J. Ackerman, Ph.D. National Library of Medicine
  2. Everette Burdette Acoustic MedSystems, Inc.
  3. German Cavelier NIHNIMH
  4. Kevin Cleary Georgetown University collaborator
  5. Zohara Cohen National Institutes of Health
  6. Jack Collins SAIC-Frederick, Inc.
  7. Gabor Fichtinger Queens University
  8. Chris Johnson External Advisory Board EAB member
  9. Danial Lashkari MIT MIT
  10. Mikhail Milchenko Washington University at St Louis 2
  11. Sandy Napel Stanford EAB member
  12. Godfrey Pearlson Yale EAB member
  13. Fred Prior External Advisory Board EAB member
  14. Mike Sherman Stanford Invited Speaker
  15. Arthur Toga Laboratory of Neuro Imaging, UCLA
  16. Chris Wyatt Virginia Tech Collaborator
  17. Terry S. Yoo National Library of Medicine

AHM and Project Event

  1. Douglas Alan Harvard University IIC Collaborator
  2. Luca Antiga Mario Negri Institute
  3. Kevin Archie Washington University School of Medicine
  4. Nicole Aucoin Brigham and Women's Hospital 2
  5. Stephen Aylward Kitware, Inc.
  6. Serdar Balci MIT
  7. Sebastien Barre Kitware, Inc.
  8. Jack Blevins Acoustic MedSystems, Inc.
  9. Daniel Blezek Mayo Clinic External
  10. H Jeremy Bockholt The MIND Research Network MIND DBP2
  11. Sylvain Bouix Brigham and Womens Hospital Psychiatry Neuroimaging Lab Core 3
  12. Francois Budin Brigham and Womens Hospital
  13. Patrick Cheng Georgetown University collaborator
  14. Kiyoyuki Chinzei AIST, Japan
  15. Nikos Chrisochoides College of William and Mary
  16. Csaba Csoma Johns Hopkins University
  17. Brad Davis Kitware, Inc.
  18. Preston Tom Fletcher SCI Institute
  19. Andreas Freudling Brigham and Women's Hospital Leadership Core
  20. Yi Gao Georgia Tech
  21. Guido Gerig SCI Institute
  22. David Gobbi Queens University DBP2
  23. Polina Golland MIT Core 1
  24. Randy Gollub MGH Department of Psychiatry Core 5
  25. Casey Goodlett SCI Institute
  26. Alexandre Gouaillard Caltech
  27. Sylvain Gouttard SCI Institute
  28. Benjamin Grauer Brigham and Women's Hospital Leadership Core
  29. Jeffrey Grethe UCSD 2
  30. Nicole Grosland The University of Iowa, CCAD
  31. Nathan Hageman UCLA
  32. Michael Halle Brigham and Women's Hospital Leadership Core
  33. Nobuhiko Hata Brigham and Women's Hospital Leadership Core
  34. Nobuhiko Hata Brigham and Women's Hospital
  35. Kathryn Hayes Brigham and Womens Hospital 2 - Engineering
  36. Heather Cody Hazlett University of North Carolina DBP Core2
  37. Bill Hoffman Kitware, Inc.
  38. Jaesung Hong Kyushu University
  39. Luis Ibanez Kitware, Inc.
  40. Mustafa Okan Irfanoglu OSU
  41. Firdaus Janoos ohio-state univ
  42. Julien Jomier Kitware, Inc.
  43. Usman Khan Brigham and Womens Hospital
  44. Ron Kikinis Brigham and Womens Hospital Leadership Core
  45. Marek Kubicki Brigham and Womens Hospital
  46. Curtis Lisle KnowledgeVis, LLC 2
  47. Haiying Liu Brigham and Womens Hospital
  48. William Lorensen External Advisory Board EAB
  49. Raghu Machiraju The Ohio State University
  50. Vincent Magnotta The University of Iowa, CCAD
  51. Daniel Marcus Washington University Core 2
  52. Doug Markant Brigham and Women's Hospital Leadership Core
  53. Katie Mastrogiacomo SPL, Brigham and Women's Hospital Leadership Core
  54. Sean Megason Caltech
  55. John Melonakos Georgia Tech
  56. James V Miller GE Global Research
  57. Vandana Mohan Georgia Inst of Technology 1
  58. Kishore Mosaliganti The Ohio State University
  59. Tri Ngo MIT
  60. Ipek Oguz UNC 2
  61. Steve Pieper Isomics, Inc. 2, 6
  62. Carlo Pierpaoli NIH
  63. Wendy Plesniak Brigham and Women's Hospital Leadership Core
  64. Kilian Pohl Brigham and Women's Hospital 1
  65. Marcel Prastawa SCI Institute
  66. Sonia Pujol Brigham and Women's Hospital Leadership Core
  67. Katharina Quintus Brigham and Women's Hospital Leadership Core
  68. Yogesh Rathi Brigham and Womens Hospital
  69. Mert Sabuncu MIT
  70. Will Schroeder Kitware, Inc.
  71. Mark Scully The MIND Research Network
  72. Li Shen Indiana University
  73. Kiran Shivanna The University of Iowa, CCAD
  74. Martin Styner UNC Chapel Hill 1
  75. Padma Sundaram Brigham and Womens Hospital Brigham and Womens
  76. Xiaodong Tao GE
  77. Kinh Tieu Brigham and Women's Hospital
  78. Junichi Tokuda Brigham and Women's Hospital Leadership Core
  79. Clement Vachet UNC Chapel Hill 3
  80. Koen Van Leemput MIT
  81. Sandy Wells Brigham and Womens Hospital
  82. Carl-Fredrik Westin Brigham and Womens Hospital NAC
  83. Nathan Wilson Cardiovascular Simulation, Inc.
  84. Alexander Yarmarkovich Isomics, Inc. Engineering Core 2
  85. Anastasia Yendiki MGH
  86. Boon Thye Yeo MIT
  87. Tim Yin Stony Brook University

This is the list of attendees who have registered as of January 5, 2008. Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow this registration link to complete your online registration. The organizers will periodically publish the list of registered attendees in the space above. Attendees should NOT add their names in this section.