Difference between revisions of "AHM 2008"

From NAMIC Wiki
Jump to: navigation, search
 
(57 intermediate revisions by 23 users not shown)
Line 1: Line 1:
 
__NOTOC__
 
__NOTOC__
 +
Back to [[Events]]
 +
 
== Introduction ==
 
== Introduction ==
 
 
  
 
{| border="00" cellpadding="8" cellspacing="0"
 
{| border="00" cellpadding="8" cellspacing="0"
 
|-
 
|-
| rowspan="2"| NA-MIC participants meet for a all-hands meeting (AHM) once a year. The purpose of the AHM is to coordinate, discuss plans and report to NIH officers and the external advisory board (EAB). The external advisory board meets with the NA-MIC leadership immediately after the AHM. In parallel, NA-MIC is organizing a project week. These events, with the exception of the EAB meeting, are open to collaborators and potential collaborators.
+
| rowspan="2"| '''This is the home page for the 2008 NA-MIC all hands meeting (AHM).''' NA-MIC participants meet for a AHM once a year. The purpose of the AHM is to coordinate, discuss plans and report to NIH officers and the external advisory board (EAB). The external advisory board meets with the NA-MIC leadership immediately after the AHM. In parallel, NA-MIC is organizing a project week. These events, with the exception of the EAB meeting, are open to collaborators and potential collaborators.
  
 
For more information about the project weeks in general, click [[Engineering:Programming_Events|'''here''']].  
 
For more information about the project weeks in general, click [[Engineering:Programming_Events|'''here''']].  
Line 15: Line 15:
 
| style="background: #ebeced" colspan="2" align="center"| [[Image:SLC.jpg|center|350px|View of the City]]
 
| style="background: #ebeced" colspan="2" align="center"| [[Image:SLC.jpg|center|350px|View of the City]]
 
|-
 
|-
| style="background: #ebeced"| <b>SLC</b>
+
| style="background: #ebeced"|The 2008 AHM, EAB and Project Week was held in Salt Lake City, UT, January 7-11, 2008.  
| style="background: #ebeced"|The combined AHM, EAB and Project Week will be held in Salt Lake City, UT, January 7-11 2008.  
 
 
|}
 
|}
 
<br />
 
<br />
 
== Dates. Venue. Registration ==
 
 
'''Dates:'''
 
* The All Hands Meeting and External Advisory Board Meeting will be held on '''Thursday, January 10th'''. 
 
* Project Activities will be held rest of the week between '''Monday, January 7th and Friday, January 11th'''.
 
 
'''Venue:''' The venue for the meeting is [http://www.marriott.com/hotels/travel/slccc-salt-lake-city-marriott-city-center/ Marriot City Center, Salt Lake City, Utah] Mariott City Center, Salt Lake City, Utah. [http://marriott.com/property/meetingsandevents/floorplans/slccc (Floorplan)]. To reserve rooms at the meeting rate of $129/night, please either call the hotel at 1-801-961-8700 or 1-866-961-8700 (toll free) and mention that you are attending the NAMIC meeting or book online by using the code SCISCIA. Please note that we do need attendees to use this hotel in order to not incur additional charges for the use of conference rooms.
 
 
<big> '''Registration:''' We are charging a registration fee to all participants. The fee covers the costs of the facilities and food provided. In order to keep the fee low, we need to get a sufficient number of hotel nights by our participants. See above for more on this. Please click [http://www.sci.utah.edu/namic2008/registration.html '''here'''] for online registration. This registration must be completed by Friday, December 14, 2007. </big>
 
  
 
== Agenda ==
 
== Agenda ==
Line 42: Line 31:
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|
 
| style="background:#ffffdd; color:black"|
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] '''
+
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol B-C]
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] '''
+
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol B-C]
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] '''
+
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol B-C]
| style="background:#fff6a6; color:#522200"| '''AHM, [[2008_EAB|EAB]]'''
+
| style="background:#fff6a6; color:#522200"| '''AHM''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol A-B], [[2008_EAB|'''EAB''']] in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Olympus B]
| style="background:#b4d597; color:#522200"| '''[[2008_Winter_Project_Week|Project Activities]] '''
+
'''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Olympus A]
 +
| style="background:#b4d597; color:#522200"|'''[[2008_Winter_Project_Week|Project Activities]] ''' in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol B-C]
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''7:30-'''  
 
| style="background:#ffffdd; color:black"|'''7:30-'''  
Line 56: Line 46:
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''8:00-10:00'''  
 
| style="background:#ffffdd; color:black"|'''8:00-10:00'''  
| style="background:#ebeced; color:black"|
+
| style="background:#ebeced; color:black"|'''9:30''' Core 1 and 2 PI closed session in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Capitol A]
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Plug-ins for Slicer3|Plug-ins for Slicer3]]
+
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Plug-ins for Slicer3|Plug-ins for Slicer3]] in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
| style="background:#b4d597; color:black"|Project Work <br>'''8:00-9:00''' [[2008 Winter Project Week IGT|IGT Breakout Session]]<br>
+
| style="background:#b4d597; color:black"|Project Work <br>'''8:00-9:00''' [[2008 Winter Project Week IGT|IGT Breakout Session]] [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
9am: [[2008 Winter Project Week Tractography|Tractography Breakout Session]]  
+
<br>
| style="background:#fff6a6; color:black"|
+
9am: [[2008 Winter Project Week Tractography|Tractography Breakout Session]] in [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 2]
 +
| style="background:#fff6a6; color:black"|<br>
 
'''8:00''' [[AHM 2008 Introduction|Introduction]], Ron Kikinis <br>
 
'''8:00''' [[AHM 2008 Introduction|Introduction]], Ron Kikinis <br>
  
 
'''Core 1 and 2 Presentations'''<br>
 
'''Core 1 and 2 Presentations'''<br>
'''8:05''' Utah 1, Ross Whitaker<br>
+
'''8:05''' [[Media:NAMIC-AHM2008-Utah1.ppt | Utah 1]], Ross Whitaker<br>
'''8:20''' Utah 2, Guido Gerig<br>
+
'''8:20''' [[Media:Utah-Gerig-EAB.ppt‎ | Utah 2]], Guido Gerig<br>
'''8:30''': MIT, Polina Golland<br>
+
'''8:30''': [[Media:MIT_NAMIC_AHM2008.ppt‎ | MIT]], Polina Golland<br>
'''8:45''': Georgia Tech, Allen Tannenbaum<br>
+
'''8:45''': [[Media:20080110-AHM-GeorgiaTech.zip|Georgia Tech]], Allen Tannenbaum<br>
'''9:00''': UNC, Martin Styner<br>
+
'''9:00''': [[Media:2008 UNC Core1 NAMIC AHM.ppt | UNC]], Martin Styner<br>
'''9:10''': MGH/WUSTL, Dan Marcus<br>
+
'''9:10''': [[Media:namic_ahm_nrg.ppt | MGH/WUSTL]], Dan Marcus<br>
'''9:25''': Kitware, Will Schroeder<br>
+
'''9:25''': [[media:2008_NA-MIC_AHM_Kitware.ppt | Kitware]], Will Schroeder<br>
'''9:40''': GE Research, Jim Miller
+
'''9:40''': [[Media:GE Research AHM 2008.ZIP | GE Research]], Jim Miller
| style="background:#b4d597; color:black"|Project Work
+
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Python|Python mini-Breakout Session]]
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''10:00-10:30'''  
 
| style="background:#ffffdd; color:black"|'''10:00-10:30'''  
| style="background:#ebeced; color:black"|  
+
| style="background:#ebeced; color:black"| Core 1 and 2 PI closed session
 
| style="background:#b4d597; color:black"| Coffee
 
| style="background:#b4d597; color:black"| Coffee
 
| style="background:#b4d597; color:black"| Coffee
 
| style="background:#b4d597; color:black"| Coffee
Line 82: Line 73:
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''10:30-12:00'''  
 
| style="background:#ffffdd; color:black"|'''10:30-12:00'''  
| style="background:#ebeced; color:black"|
+
| style="background:#ebeced; color:black"| Core 1 and 2 PI closed session
 
| style="background:#b4d597; color:black"|Project Work  
 
| style="background:#b4d597; color:black"|Project Work  
 
| style="background:#b4d597; color:black"|Project Work <br>
 
| style="background:#b4d597; color:black"|Project Work <br>
 
[[2008 Winter Project Week Tractography|Tractography Breakout Session contd]]   
 
[[2008 Winter Project Week Tractography|Tractography Breakout Session contd]]   
 
| style="background:#fff6a6; color:black"|
 
| style="background:#fff6a6; color:black"|
'''10:30''': Isomics, Steve Pieper<br>
+
'''10:30''': [[media:2008 NA-MIC AHM Isomics.ppt | Isomics]], Steve Pieper<br>
'''10:45''': UCSD, Mark Ellisman<br>
+
'''10:45''': [[media:NA-MIC_2008AHM_UCSD.ppt | UCSD]], Mark Ellisman<br>
'''11:00''': UCLA, Arthur Toga<br>
+
'''11:00''': [[media:Toga NAMIC 2008.zip|UCLA]], Arthur Toga<br>
'''11:15''': Outreach, Randy Gollub<br>
+
'''11:15''': Outreach: [[media:NA-MIC.2008.AHM.Core5.6.ppt|Training & Dissemination]], Randy Gollub<br>
'''11:25''': Invited speaker: Mike Sherman, Stanford NCBC Simbios, SimTK Architect
+
'''11:25''': Invited [[media:Simbios-AHM-2008.zip|talk]]: Mike Sherman, Stanford NCBC Simbios, SimTK Architect
| style="background:#b4d597; color:black"|Project Work Summaries
+
| style="background:#b4d597; color:black"|Project Work
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''12:00-1:00'''   
 
| style="background:#ffffdd; color:black"|'''12:00-1:00'''   
Line 103: Line 94:
 
| style="background:#ffffdd; color:black"|'''1:00-3:00'''  
 
| style="background:#ffffdd; color:black"|'''1:00-3:00'''  
 
| style="background:#b4d597; color:black"|Introduce Projects and Participants  
 
| style="background:#b4d597; color:black"|Introduce Projects and Participants  
| style="background:#b4d597; color:black"|Breakout: [[2008 Winter Project Week Geometry and Topology processing of Meshes|Geometry and Topology processing of Meshes]]
+
| style="background:#b4d597; color:black"|Breakout: [[2008 Winter Project Week Geometry and Topology processing of Meshes|Geometry and Topology processing of Meshes]] [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amthyst 1]
 
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Tractography|Tractography Breakout Session contd]]  
 
| style="background:#b4d597; color:black"|Project Work <br> [[2008 Winter Project Week Tractography|Tractography Breakout Session contd]]  
 
| style="background:#fff6a6; color:black"|
 
| style="background:#fff6a6; color:black"|
 
'''DBP results''' <br>
 
'''DBP results''' <br>
'''1:00''': Queens/JHU, Gabor Fichtinger<br>
+
'''1:00''': [[Media:DBP2-Prostate-AHM2008.ppt | Queens/JHU]][[Media:DBP2-Prostate-AHM2008.pdf | (pdf)]], David Gobbi<br>
'''1:15''':UNC, Heather Cody Hazlett<br>
+
'''1:15''':[[Media:UNC DBP 2_longitudinal autism study_AHM jan08.ppt| UNC]], Heather Cody Hazlett<br>
'''1:30''':Harvard, Marek Kubicki<br>
+
'''1:30''':[[Media:NA-MIC_Kubicki.ppt | Harvard]], Marek Kubicki<br>
'''1:45''':MIND/UNM, Jeremy Bockholt<br>
+
'''1:45''':[[Media:DBP2_MIND_Lupus_200801_update.ppt | MIND/UNM]], Jeremy Bockholt<br>
  
 
'''NCBC Collaborations'''<br>
 
'''NCBC Collaborations'''<br>
'''2:00''': Georgetown, Kevin Cleary<br>
+
'''2:00''': [[Media:NA-MIC_Cleary_RF_Ablation_Georgetown.pdf|Georgetown]], Kevin Cleary<br>
'''2:15''': Wakeforest, Chris Wyatt<br>
+
'''2:15''': [[Media:External-Wyatt-WFUSM.ppt‎|Wake Forest/VT]], Chris Wyatt<br>
'''2:30''': UIowa, Nicole Grosland,Vincent Magnotta<br>
+
'''2:30''': [[Media:NA-MIC Mesh Collaboration - 2008.ppt| UIowa]], Nicole Grosland,Vincent Magnotta<br>
 
| style="background:#ebeced; color:black"|
 
| style="background:#ebeced; color:black"|
 
|-
 
|-
Line 126: Line 117:
 
|-
 
|-
 
| style="background:#ffffdd; color:black"|'''3:00-5:00'''  
 
| style="background:#ffffdd; color:black"|'''3:00-5:00'''  
| style="background:#b4d597; color:black"|'''3:00-4:00''' Slicer Update <br>
+
| style="background:#b4d597; color:black"|'''3:00-4:00''' Slicer Update [[Media:2008 NA-MIC AHM Slicer3.ppt | Slides]]<br>
'''4:00-5:00''' Breakout: [[2008 Winter Project Week EM Segmenter User Group|EM Segmenter User Group]]
+
'''4:00-5:00''' Breakout: [[2008 Winter Project Week EM Segmenter User Group|EM Segmenter User Group]] [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
| style="background:#b4d597; color:black"|Project Work <br>[[2008_Winter_Project_Week_Image_Registration_Update| Registration Breakout]]
+
| style="background:#b4d597; color:black"|Project Work <br>[[2008_Winter_Project_Week_Image_Registration_Update| Registration Breakout]] [http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
| style="background:#b4d597; color:black"|Project Work <br>'''3:00-4:00''' [[2008 Winter Project Week Batchmake Update|Batchmake Update]]<br>
+
| style="background:#b4d597; color:black"|Project Work <br>'''3:00-4:00''' [[2008 Winter Project Week Batchmake Update|Batchmake Update]]<br>[http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Amethyst 1]
 
[[2008 Winter Project Week Tractography|Tractography Breakout Session contd]] <br>
 
[[2008 Winter Project Week Tractography|Tractography Breakout Session contd]] <br>
 
+
| style="background:#fff6a6; color:black"|[[2008 EAB|EAB]]<br>[http://www.marriott.com/hotels/event-planning/floor-plans/slccc-salt-lake-city-marriott-city-center/ Olympus B]<br>'''3:00-4:00''' Discussion with NA-MIC Leadership<br> '''4:00-5:00''' Closed Session
| style="background:#fff6a6; color:black"|[[2008 EAB|EAB]]<br>'''3:00-4:00''' Discussion with NA-MIC Leadership<br> '''4:00-5:00''' Closed Session
 
 
| style="background:#ebeced; color:black"|
 
| style="background:#ebeced; color:black"|
 
|-
 
|-
Line 138: Line 128:
 
| style="background:#b4d597; color:black"|
 
| style="background:#b4d597; color:black"|
 
| style="background:#b4d597; color:black"|
 
| style="background:#b4d597; color:black"|
| style="background:#b4d597; color:black"|
+
| style="background:#b4d597; color:black"|'''5:00''' Optional: [[2008-SCI-tour|Tour]] of the new SCI building
 
| style="background:#fff6a6; color:black"|'''6:00''' Optional: [http://www.skisaltlake.com/murphys.htm Beer at Murphy's] (like last year)
 
| style="background:#fff6a6; color:black"|'''6:00''' Optional: [http://www.skisaltlake.com/murphys.htm Beer at Murphy's] (like last year)
 
| style="background:#ebeced; color:black"|  
 
| style="background:#ebeced; color:black"|  
Line 144: Line 134:
  
 
Please note that there will be a Core 1&2 Site PI Retreat on the morning of Monday, January 7th. This is a closed session for Core 1&2 Site PIs, with no delegates. The topic is the competitive renewal.
 
Please note that there will be a Core 1&2 Site PI Retreat on the morning of Monday, January 7th. This is a closed session for Core 1&2 Site PIs, with no delegates. The topic is the competitive renewal.
 +
 +
== Dates. Venue. Registration ==
 +
 +
'''Dates:'''
 +
* The All Hands Meeting and External Advisory Board Meeting will be held on '''Thursday, January 10th'''. 
 +
* Project Activities will be held rest of the week between '''Monday, January 7th and Friday, January 11th'''.
 +
 +
'''Venue:''' The venue for the meeting is [http://www.marriott.com/hotels/travel/slccc-salt-lake-city-marriott-city-center/ Marriot City Center, Salt Lake City, Utah] Mariott City Center, Salt Lake City, Utah. [http://marriott.com/property/meetingsandevents/floorplans/slccc (Floorplan)]. To reserve rooms at the meeting rate of $129/night, please either call the hotel at 1-801-961-8700 or 1-866-961-8700 (toll free) and mention that you are attending the NAMIC meeting or book online by using the code SCISCIA. Please note that we do need attendees to use this hotel in order to not incur additional charges for the use of conference rooms.
 +
 +
'''Registration:''' We are charging a registration fee to all participants. The fee covers the costs of the facilities and food provided. In order to keep the fee low, we need to get a sufficient number of hotel nights by our participants. See above for more on this. Please click [http://www.sci.utah.edu/namic2008/registration.html '''here'''] for online registration. This registration must be completed by Friday, December 14, 2007.
 +
 +
'''Connectivity'''
 +
We have three wireless access points at the AHM. Two of them are located in the capital ballroom.  One is named capital-ballroom, the other is named capital-ballroom2.  If one access point doesn't let you connect it is probably overloaded.  In that case, please try connecting to the other one.
  
 
== Attendees ==
 
== Attendees ==
Line 149: Line 152:
 
Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow [http://www.sci.utah.edu/namic2008/registration.html this registration link] to complete your online registration.  The organizers will periodically publish the list of registered attendees in the space below.  Attendees should '''NOT''' add their names in this section.
 
Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow [http://www.sci.utah.edu/namic2008/registration.html this registration link] to complete your online registration.  The organizers will periodically publish the list of registered attendees in the space below.  Attendees should '''NOT''' add their names in this section.
  
This is the list of attendees who have registered as of Dec 19 2007
+
This is the list of attendees who have registered as of January 5, 2008
  
 
===AHM===
 
===AHM===
 
# Michael J. Ackerman, Ph.D. National Library of Medicine
 
# Michael J. Ackerman, Ph.D. National Library of Medicine
 +
# Everette Burdette Acoustic MedSystems, Inc.
 
# German Cavelier NIHNIMH
 
# German Cavelier NIHNIMH
 
# Kevin Cleary Georgetown University collaborator
 
# Kevin Cleary Georgetown University collaborator
Line 158: Line 162:
 
# Jack Collins SAIC-Frederick, Inc.
 
# Jack Collins SAIC-Frederick, Inc.
 
# Gabor Fichtinger Queens University
 
# Gabor Fichtinger Queens University
# Polina Golland MIT Core 1
 
 
# Chris Johnson External Advisory Board EAB member
 
# Chris Johnson External Advisory Board EAB member
# Marek Kubicki Brigham and Womens Hospital
 
 
# Danial Lashkari MIT MIT
 
# Danial Lashkari MIT MIT
 
# Mikhail Milchenko Washington University at St Louis 2
 
# Mikhail Milchenko Washington University at St Louis 2
Line 169: Line 171:
 
# Arthur Toga Laboratory of Neuro Imaging, UCLA
 
# Arthur Toga Laboratory of Neuro Imaging, UCLA
 
# Chris Wyatt Virginia Tech Collaborator
 
# Chris Wyatt Virginia Tech Collaborator
# Terry S. Yoo National Library of Medicine
+
# Terry S. Yoo National Library of Medicine
  
 
===AHM and Project Event===
 
===AHM and Project Event===
# Douglas Alan Harvard University IIC
+
# Douglas Alan Harvard University IIC Collaborator
# Luca Antiga Mario Negri Institute
+
# Luca Antiga Mario Negri Institute
# Kevin Archie Washington University School of Medicine
+
# Kevin Archie Washington University School of Medicine
# Nicole Aucoin BWH
+
# Nicole Aucoin Brigham and Women's Hospital 2
# Stephen Aylward Kitware, Inc.
+
# Stephen Aylward Kitware, Inc.
# serdar balci MIT
+
# Serdar Balci MIT
# Sebastien Barre Kitware, Inc.
+
# Sebastien Barre Kitware, Inc.
# Daniel Blezek Mayo Clinic
+
# Jack Blevins Acoustic MedSystems, Inc.
# H Jeremy Bockholt The MIND Research Network
+
# Daniel Blezek Mayo Clinic External
# Sylvain Bouix Brigham and Womens Hospital
+
# H Jeremy Bockholt The MIND Research Network MIND DBP2
# Francois Budin Brigham and Womens Hospital
+
# Sylvain Bouix Brigham and Womens Hospital Psychiatry Neuroimaging Lab Core 3
# Patrick Cheng Georgetown University
+
# Francois Budin Brigham and Womens Hospital
# Kiyoyuki Chinzei AIST, Japan
+
# Patrick Cheng Georgetown University collaborator
# NIKOS CHRISOCHOIDES COLLEGE OF WILLIAM AND MARY
+
# Kiyoyuki Chinzei AIST, Japan
# Csaba Csoma Johns Hopkins University
+
# Nikos Chrisochoides College of William and Mary
# Brad Davis Kitware, Inc.
+
# Csaba Csoma Johns Hopkins University
# Preston Tom Fletcher SCI Institute
+
# Brad Davis Kitware, Inc.
# Andreas Freudling BWH
+
# Preston Tom Fletcher SCI Institute
# Yi Gao Georgia Tech
+
# Andreas Freudling Brigham and Women's Hospital Leadership Core
# Guido Gerig SCI Institute
+
# Yi Gao Georgia Tech
# David Gobbi Queens University
+
# Guido Gerig SCI Institute
# Randy Gollub MGH Department of Psychiatry
+
# David Gobbi Queens University DBP2
# Casey Goodlett SCI Institute
+
# Polina Golland MIT Core 1
# Alexandre Gouaillard Caltech
+
# Randy Gollub MGH Department of Psychiatry Core 5
# Sylvain Gouttard SCI Institute
+
# Casey Goodlett SCI Institute
# Benjamin Grauer BWH
+
# Alexandre Gouaillard Caltech
# Jeffrey Grethe UCSD
+
# Sylvain Gouttard SCI Institute
# Nicole Grosland The University of Iowa, CCAD
+
# Benjamin Grauer Brigham and Women's Hospital Leadership Core
# Nathan Hageman UCLA
+
# Jeffrey Grethe UCSD 2
# Michael Halle BWH
+
# Nicole Grosland The University of Iowa, CCAD
# Kathryn Hayes Brigham and Womens Hospital
+
# Nathan Hageman UCLA
# Heather Cody Hazlett University of North Carolina
+
# Michael Halle Brigham and Women's Hospital Leadership Core
# Bill Hoffman Kitware, Inc.
+
# Nobuhiko Hata Brigham and Women's Hospital Leadership Core
# Jaesung Hong Kyushu University
+
# Nobuhiko Hata Brigham and Women's Hospital
# Luis Ibanez Kitware, Inc.
+
# Kathryn Hayes Brigham and Womens Hospital 2 - Engineering
# Mustafa Okan Irfanoglu OSU
+
# Heather Cody Hazlett University of North Carolina DBP Core2
# firdaus janoos ohio-state univ
+
# Bill Hoffman Kitware, Inc.
# Julien Jomier Kitware, Inc.
+
# Jaesung Hong Kyushu University
# Ron Kikinis Brigham and Womens Hospital
+
# Luis Ibanez Kitware, Inc.
# Curtis Lisle KnowledgeVis, LLC
+
# Mustafa Okan Irfanoglu OSU
# Haiying Liu Brigham and Womens Hospital
+
# Firdaus Janoos ohio-state univ
# William Lorensen External Advisory Board
+
# Julien Jomier Kitware, Inc.
# raghu machiraju The Ohio State University
+
# Usman Khan Brigham and Womens Hospital
# Vincent Magnotta The University of Iowa, CCAD
+
# Ron Kikinis Brigham and Womens Hospital Leadership Core
# Daniel Marcus Washington University
+
# Marek Kubicki Brigham and Womens Hospital
# Doug Markant BWH
+
# Curtis Lisle KnowledgeVis, LLC 2
# Katie Mastrogiacomo SPL, BWH
+
# Haiying Liu Brigham and Womens Hospital
# Sean Megason Caltech
+
# William Lorensen External Advisory Board EAB
# John Melonakos Georgia Tech
+
# Raghu Machiraju The Ohio State University
# James V Miller GE Global Research
+
# Vincent Magnotta The University of Iowa, CCAD
# Vandana Mohan Georgia Inst of Technology
+
# Daniel Marcus Washington University Core 2
# Kishore Mosaliganti The Ohio State University
+
# Doug Markant Brigham and Women's Hospital Leadership Core
# Tri Ngo MIT
+
# Katie Mastrogiacomo SPL, Brigham and Women's Hospital Leadership Core
# Ipek Oguz UNC
+
# Sean Megason Caltech
# Steve Pieper Isomics, Inc.
+
# John Melonakos Georgia Tech
# carlo pierpaoli NIH  
+
# James V Miller GE Global Research
# Wendy Plesniak BWH
+
# Vandana Mohan Georgia Inst of Technology 1
# Kilian Pohl BWH
+
# Kishore Mosaliganti The Ohio State University
# Marcel Prastawa SCI Institute
+
# Tri Ngo MIT
# Sonia Pujol BWH
+
# Ipek Oguz UNC 2
# Katharina Quintus BWH
+
# Steve Pieper Isomics, Inc. 2, 6
# Yogesh Rathi Brigham and Womens Hospital
+
# Carlo Pierpaoli NIH
# Mert Sabuncu MIT
+
# Wendy Plesniak Brigham and Women's Hospital Leadership Core
# Raul San Jose BWH
+
# Kilian Pohl Brigham and Women's Hospital 1
# Will Schroeder Kitware, Inc.
+
# Marcel Prastawa SCI Institute
# Mark Scully The MIND Research Network
+
# Sonia Pujol Brigham and Women's Hospital Leadership Core
# Li Shen Indiana University
+
# Katharina Quintus Brigham and Women's Hospital Leadership Core
# Kiran Shivanna The University of Iowa, CCAD
+
# Yogesh Rathi Brigham and Womens Hospital
# Martin Styner UNC Chapel Hill
+
# Mert Sabuncu MIT
# Padma Sundaram Brigham and Womens Hospital
+
# Will Schroeder Kitware, Inc.
# Xiaodong Tao GE
+
# Mark Scully The MIND Research Network
# Kinh Tieu BWH
+
# Li Shen Indiana University
# Junichi Tokuda BWH
+
# Kiran Shivanna The University of Iowa, CCAD
# Clement Vachet UNC Chapel Hill
+
# Martin Styner UNC Chapel Hill 1
# Koen Van Leemput MIT
+
# Padma Sundaram Brigham and Womens Hospital Brigham and Womens
# Carl-Fredrik Westin Brigham and Womens Hospital
+
# Xiaodong Tao GE
# Nathan Wilson Cardiovascular Simulation, Inc.
+
# Kinh Tieu Brigham and Women's Hospital
# Alexander Yarmarkovich BWH
+
# Junichi Tokuda Brigham and Women's Hospital Leadership Core
# Anastasia Yendiki MGH
+
# Clement Vachet UNC Chapel Hill 3
# Boon Thye Yeo MIT
+
# Koen Van Leemput MIT
 
+
# Sandy Wells Brigham and Womens Hospital
 
+
# Carl-Fredrik Westin Brigham and Womens Hospital NAC
 
+
# Nathan Wilson Cardiovascular Simulation, Inc.
 +
# Alexander Yarmarkovich Isomics, Inc. Engineering Core 2
 +
# Anastasia Yendiki MGH
 +
# Boon Thye Yeo MIT
 +
# Tim Yin Stony Brook University
  
This is the list of attendees who have registered as of Dec 17 2007. Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow [http://www.sci.utah.edu/namic2008/registration.html this registration link] to complete your online registration.  The organizers will periodically publish the list of registered attendees in the space above.  Attendees should '''NOT''' add their names in this section.
+
This is the list of attendees who have registered as of January 5, 2008. Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow [http://www.sci.utah.edu/namic2008/registration.html this registration link] to complete your online registration.  The organizers will periodically publish the list of registered attendees in the space above.  Attendees should '''NOT''' add their names in this section.

Latest revision as of 15:40, 9 December 2016

Home < AHM 2008

Back to Events

Introduction

This is the home page for the 2008 NA-MIC all hands meeting (AHM). NA-MIC participants meet for a AHM once a year. The purpose of the AHM is to coordinate, discuss plans and report to NIH officers and the external advisory board (EAB). The external advisory board meets with the NA-MIC leadership immediately after the AHM. In parallel, NA-MIC is organizing a project week. These events, with the exception of the EAB meeting, are open to collaborators and potential collaborators.

For more information about the project weeks in general, click here.

For information about the January 2008 project week, see below or click here.

For information about Utah as a travel destination click here.

View of the City
The 2008 AHM, EAB and Project Week was held in Salt Lake City, UT, January 7-11, 2008.


Agenda

Time Monday, January 7 Tuesday, January 8 Wednesday, January 9 Thursday, January 10 Friday, January 11
Project Activities in Capitol B-C Project Activities in Capitol B-C Project Activities in Capitol B-C AHM in Capitol A-B, EAB in Olympus B

Project Activities in Olympus A

Project Activities in Capitol B-C
7:30- Breakfast Breakfast Breakfast Breakfast
8:00-10:00 9:30 Core 1 and 2 PI closed session in Capitol A Project Work
Plug-ins for Slicer3 in Amethyst 1
Project Work
8:00-9:00 IGT Breakout Session Amethyst 1


9am: Tractography Breakout Session in Amethyst 2


8:00 Introduction, Ron Kikinis

Core 1 and 2 Presentations
8:05 Utah 1, Ross Whitaker
8:20 Utah 2, Guido Gerig
8:30: MIT, Polina Golland
8:45: Georgia Tech, Allen Tannenbaum
9:00: UNC, Martin Styner
9:10: MGH/WUSTL, Dan Marcus
9:25: Kitware, Will Schroeder
9:40: GE Research, Jim Miller

Project Work
Python mini-Breakout Session
10:00-10:30 Core 1 and 2 PI closed session Coffee Coffee Coffee Coffee
10:30-12:00 Core 1 and 2 PI closed session Project Work Project Work

Tractography Breakout Session contd

10:30: Isomics, Steve Pieper
10:45: UCSD, Mark Ellisman
11:00: UCLA, Arthur Toga
11:15: Outreach: Training & Dissemination, Randy Gollub
11:25: Invited talk: Mike Sherman, Stanford NCBC Simbios, SimTK Architect

Project Work
12:00-1:00 Lunch Lunch
DPB Engineers Lunch meeting
Lunch
Birds of a Feather: fMRI
Lunch Adjourn
1:00-3:00 Introduce Projects and Participants Breakout: Geometry and Topology processing of Meshes Amthyst 1 Project Work
Tractography Breakout Session contd

DBP results
1:00: Queens/JHU (pdf), David Gobbi
1:15: UNC, Heather Cody Hazlett
1:30: Harvard, Marek Kubicki
1:45: MIND/UNM, Jeremy Bockholt

NCBC Collaborations
2:00: Georgetown, Kevin Cleary
2:15: Wake Forest/VT, Chris Wyatt
2:30: UIowa, Nicole Grosland,Vincent Magnotta

3:30-4:00 Coffee Coffee Coffee Coffee
3:00-5:00 3:00-4:00 Slicer Update Slides

4:00-5:00 Breakout: EM Segmenter User Group Amethyst 1

Project Work
Registration Breakout Amethyst 1
Project Work
3:00-4:00 Batchmake Update
Amethyst 1

Tractography Breakout Session contd

EAB
Olympus B
3:00-4:00 Discussion with NA-MIC Leadership
4:00-5:00 Closed Session
05:00-07:00 5:00 Optional: Tour of the new SCI building 6:00 Optional: Beer at Murphy's (like last year)

Please note that there will be a Core 1&2 Site PI Retreat on the morning of Monday, January 7th. This is a closed session for Core 1&2 Site PIs, with no delegates. The topic is the competitive renewal.

Dates. Venue. Registration

Dates:

  • The All Hands Meeting and External Advisory Board Meeting will be held on Thursday, January 10th.
  • Project Activities will be held rest of the week between Monday, January 7th and Friday, January 11th.

Venue: The venue for the meeting is Marriot City Center, Salt Lake City, Utah Mariott City Center, Salt Lake City, Utah. (Floorplan). To reserve rooms at the meeting rate of $129/night, please either call the hotel at 1-801-961-8700 or 1-866-961-8700 (toll free) and mention that you are attending the NAMIC meeting or book online by using the code SCISCIA. Please note that we do need attendees to use this hotel in order to not incur additional charges for the use of conference rooms.

Registration: We are charging a registration fee to all participants. The fee covers the costs of the facilities and food provided. In order to keep the fee low, we need to get a sufficient number of hotel nights by our participants. See above for more on this. Please click here for online registration. This registration must be completed by Friday, December 14, 2007.

Connectivity We have three wireless access points at the AHM. Two of them are located in the capital ballroom. One is named capital-ballroom, the other is named capital-ballroom2. If one access point doesn't let you connect it is probably overloaded. In that case, please try connecting to the other one.

Attendees

Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow this registration link to complete your online registration. The organizers will periodically publish the list of registered attendees in the space below. Attendees should NOT add their names in this section.

This is the list of attendees who have registered as of January 5, 2008

AHM

  1. Michael J. Ackerman, Ph.D. National Library of Medicine
  2. Everette Burdette Acoustic MedSystems, Inc.
  3. German Cavelier NIHNIMH
  4. Kevin Cleary Georgetown University collaborator
  5. Zohara Cohen National Institutes of Health
  6. Jack Collins SAIC-Frederick, Inc.
  7. Gabor Fichtinger Queens University
  8. Chris Johnson External Advisory Board EAB member
  9. Danial Lashkari MIT MIT
  10. Mikhail Milchenko Washington University at St Louis 2
  11. Sandy Napel Stanford EAB member
  12. Godfrey Pearlson Yale EAB member
  13. Fred Prior External Advisory Board EAB member
  14. Mike Sherman Stanford Invited Speaker
  15. Arthur Toga Laboratory of Neuro Imaging, UCLA
  16. Chris Wyatt Virginia Tech Collaborator
  17. Terry S. Yoo National Library of Medicine

AHM and Project Event

  1. Douglas Alan Harvard University IIC Collaborator
  2. Luca Antiga Mario Negri Institute
  3. Kevin Archie Washington University School of Medicine
  4. Nicole Aucoin Brigham and Women's Hospital 2
  5. Stephen Aylward Kitware, Inc.
  6. Serdar Balci MIT
  7. Sebastien Barre Kitware, Inc.
  8. Jack Blevins Acoustic MedSystems, Inc.
  9. Daniel Blezek Mayo Clinic External
  10. H Jeremy Bockholt The MIND Research Network MIND DBP2
  11. Sylvain Bouix Brigham and Womens Hospital Psychiatry Neuroimaging Lab Core 3
  12. Francois Budin Brigham and Womens Hospital
  13. Patrick Cheng Georgetown University collaborator
  14. Kiyoyuki Chinzei AIST, Japan
  15. Nikos Chrisochoides College of William and Mary
  16. Csaba Csoma Johns Hopkins University
  17. Brad Davis Kitware, Inc.
  18. Preston Tom Fletcher SCI Institute
  19. Andreas Freudling Brigham and Women's Hospital Leadership Core
  20. Yi Gao Georgia Tech
  21. Guido Gerig SCI Institute
  22. David Gobbi Queens University DBP2
  23. Polina Golland MIT Core 1
  24. Randy Gollub MGH Department of Psychiatry Core 5
  25. Casey Goodlett SCI Institute
  26. Alexandre Gouaillard Caltech
  27. Sylvain Gouttard SCI Institute
  28. Benjamin Grauer Brigham and Women's Hospital Leadership Core
  29. Jeffrey Grethe UCSD 2
  30. Nicole Grosland The University of Iowa, CCAD
  31. Nathan Hageman UCLA
  32. Michael Halle Brigham and Women's Hospital Leadership Core
  33. Nobuhiko Hata Brigham and Women's Hospital Leadership Core
  34. Nobuhiko Hata Brigham and Women's Hospital
  35. Kathryn Hayes Brigham and Womens Hospital 2 - Engineering
  36. Heather Cody Hazlett University of North Carolina DBP Core2
  37. Bill Hoffman Kitware, Inc.
  38. Jaesung Hong Kyushu University
  39. Luis Ibanez Kitware, Inc.
  40. Mustafa Okan Irfanoglu OSU
  41. Firdaus Janoos ohio-state univ
  42. Julien Jomier Kitware, Inc.
  43. Usman Khan Brigham and Womens Hospital
  44. Ron Kikinis Brigham and Womens Hospital Leadership Core
  45. Marek Kubicki Brigham and Womens Hospital
  46. Curtis Lisle KnowledgeVis, LLC 2
  47. Haiying Liu Brigham and Womens Hospital
  48. William Lorensen External Advisory Board EAB
  49. Raghu Machiraju The Ohio State University
  50. Vincent Magnotta The University of Iowa, CCAD
  51. Daniel Marcus Washington University Core 2
  52. Doug Markant Brigham and Women's Hospital Leadership Core
  53. Katie Mastrogiacomo SPL, Brigham and Women's Hospital Leadership Core
  54. Sean Megason Caltech
  55. John Melonakos Georgia Tech
  56. James V Miller GE Global Research
  57. Vandana Mohan Georgia Inst of Technology 1
  58. Kishore Mosaliganti The Ohio State University
  59. Tri Ngo MIT
  60. Ipek Oguz UNC 2
  61. Steve Pieper Isomics, Inc. 2, 6
  62. Carlo Pierpaoli NIH
  63. Wendy Plesniak Brigham and Women's Hospital Leadership Core
  64. Kilian Pohl Brigham and Women's Hospital 1
  65. Marcel Prastawa SCI Institute
  66. Sonia Pujol Brigham and Women's Hospital Leadership Core
  67. Katharina Quintus Brigham and Women's Hospital Leadership Core
  68. Yogesh Rathi Brigham and Womens Hospital
  69. Mert Sabuncu MIT
  70. Will Schroeder Kitware, Inc.
  71. Mark Scully The MIND Research Network
  72. Li Shen Indiana University
  73. Kiran Shivanna The University of Iowa, CCAD
  74. Martin Styner UNC Chapel Hill 1
  75. Padma Sundaram Brigham and Womens Hospital Brigham and Womens
  76. Xiaodong Tao GE
  77. Kinh Tieu Brigham and Women's Hospital
  78. Junichi Tokuda Brigham and Women's Hospital Leadership Core
  79. Clement Vachet UNC Chapel Hill 3
  80. Koen Van Leemput MIT
  81. Sandy Wells Brigham and Womens Hospital
  82. Carl-Fredrik Westin Brigham and Womens Hospital NAC
  83. Nathan Wilson Cardiovascular Simulation, Inc.
  84. Alexander Yarmarkovich Isomics, Inc. Engineering Core 2
  85. Anastasia Yendiki MGH
  86. Boon Thye Yeo MIT
  87. Tim Yin Stony Brook University

This is the list of attendees who have registered as of January 5, 2008. Please note that unlike past events, registration will not be done on the wiki. Instead you need to follow this registration link to complete your online registration. The organizers will periodically publish the list of registered attendees in the space above. Attendees should NOT add their names in this section.