Fbirn:Slicer Tutorial

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Home < Fbirn:Slicer Tutorial

More information about 3D Slicer is available at Slicer:Slicer2.4_Getting_Started , Slicer, and at http://www.slicer.org


  • 1:15-1:45 Slicer Intro and Basics

Overview Presentation

1. Slicer intro

2. UI overview

3. loading data

4. scene representation

5. viewing data

  • 1:45-2:15 Manual and Semi-Automatic Segmentation

1. overview

2. demo: segmentation

3. demo: creating label maps

4. demo: creating models

  • 2:15-2:30 Statistical Segmentation
  • 2:30-2:45 break
  • 2:45-3:00 Registration tools

1. manual

2. auto

  • 3:00-4:15 Time series and fMRI tools:

Presentations Used: Media:IbrowserAndFMRIengine-03-23-05.ppt, Media:IbrowserAndFMRIengine-03-23-05.pdf, Media:FMRI-motivation-Sandy-2005-03-23.ppt.

1. overview of project

2. demo of Slicer 2.4 tools and related training tools

3. demo of new developments

4. overview of advanced detection methods

  • 4:15-4:45 DTI Processing

1. overview of tools

2. demo of combined visualization of fMRI and DTI data


  • Additional information

3D Slicer website: http://www.slicer.org

Downloading the software: http://www.slicer.org/download/index.html

Recent publication: [1]