Difference between revisions of "Moffitt 2014"

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   C:\Users\<your_user_name>\AppData\Roaming\NA-MIC
 
   C:\Users\<your_user_name>\AppData\Roaming\NA-MIC
 
** to enable showing hidden folders see http://windows.microsoft.com/en-us/windows/show-hidden-files#show-hidden-files=windows-7
 
** to enable showing hidden folders see http://windows.microsoft.com/en-us/windows/show-hidden-files#show-hidden-files=windows-7
** running Slicer python script from the command line: Slicer.exe --no-splash --no-main-window --python-script <script> <arguments>
+
** running Slicer python script from the command line:  
 +
  Slicer.exe --no-splash --no-main-window --python-script <script> <arguments>
 +
** to see console messages (in python interactor), run without --no-main-window flag
 
** make sure script name has '/', not '\', as path separator
 
** make sure script name has '/', not '\', as path separator
 
** make sure image volume for the RTSTRUCT is in the input folder
 
** make sure image volume for the RTSTRUCT is in the input folder

Revision as of 22:58, 15 December 2014

Home < Moffitt 2014

Logistics

Dates: Dec 16-17, 2014

Working meeting times:

  • Tue 3-4pm
  • Wed 9-10:30am
  • Wed 1-3pm

Notes and references for the meeting

  • DICOM RT conversion
    • Prerequisites: SlicerRT extension, conversion script added in the last week's version of SlicerRT
    • extensions are located on Windows in
 C:\Users\<your_user_name>\AppData\Roaming\NA-MIC
 Slicer.exe --no-splash --no-main-window --python-script <script> <arguments>
    • to see console messages (in python interactor), run without --no-main-window flag
    • make sure script name has '/', not '\', as path separator
    • make sure image volume for the RTSTRUCT is in the input folder
  • Lung and lesion segmentation
    • FastMarching effect in Editor module
    • GrowCut effect in Editor module, FastGrowCut extension