Difference between revisions of "NA"

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'''Objective:''' We want to add various statistical measures into our PDE flows for medical imaging. This will allow the incorporation of global image information into the locally defined PDE frameowrk.
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== Shape analysis of the female SPD caudate data ==
  
'''Progress:''' We developped flows which can separate the distributions inside and outside the evolving contour, and we have also been including shape information in the flows.
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The project week will be used to draft an initial revision of a paper on the analysis of the Harvard/PNL female SPD caudate dataset by means of the UNC shape analysis pipeline. (See also [[NA-MIC/Projects/Structural/Shape_Analysis/Caudate_and_Corpus_Callosum|NA-MIC/Projects/Structural/Shape Analysis/Caudate and Corpus Callosum]].)
  
'''Completed:'''
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=== Members ===
  
* A statistically based flow for image segmentation, using Fast Marching
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* James Levitt (PNL)
 
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* Marc Niethammer (PNL)
<div class="thumb tright"><div style="width: 182px">[[Image:Gatech_SlicerModel2.jpg|[[Image:180px-Gatech_SlicerModel2.jpg|Figure 1:Screenshot from the Slicer Fast Marching module]]]]<div class="thumbcaption"><div class="magnify" style="float: right">[[Image:Gatech_SlicerModel2.jpg|[[Image:magnify-clip.png|Enlarge]]]]</div>Figure 1:Screenshot from the Slicer Fast Marching module</div></div></div>
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* Sylvain Bouix (PNL)
 
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* Martin Styner (UNC)
''Code''
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* Martha Shenton (PNL)
 
 
* The code has been integrated into the Slicer
 
* A user-oriented tutorial for the Fast Marching algorithm is available at:[http://www.bme.gatech.edu/groups/minerva/publications/papers/pichon.slicer.fastMarching/index.html Slicer Module Tutorial]
 
 
 
''References:''
 
 
 
* Eric Pichon, Allen Tannenbaum, and Ron Kikinis. A statistically based surface evolution method for medical image segmentation: presentation and validation. In International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), volume 2, pages 711-720, 2003. Note: Best student presentation in image segmentation award[http://www.bme.gatech.edu/groups/minerva/publications/papers/pichon-media2004-segmentation.pdf [1]]
 
 
 
'''Key Investigators:''' Delphine Nain, Eric Pichon, Oleg Michailovich, Yogesh Rathi, James Malcolm, Allen Tannenbaum
 
 
 
'''Links:'''
 
 
 
* [[Algorithm:GATech#The_Fast_Marching_algorithm_has_been_integrated_into_the_Slicer.:GATech|GATech Tech Summary Page]]
 

Revision as of 13:28, 18 December 2006

Home < NA

Shape analysis of the female SPD caudate data

The project week will be used to draft an initial revision of a paper on the analysis of the Harvard/PNL female SPD caudate dataset by means of the UNC shape analysis pipeline. (See also NA-MIC/Projects/Structural/Shape Analysis/Caudate and Corpus Callosum.)

Members

  • James Levitt (PNL)
  • Marc Niethammer (PNL)
  • Sylvain Bouix (PNL)
  • Martin Styner (UNC)
  • Martha Shenton (PNL)