Difference between revisions of "RSNA2012 Planning"

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||7|| Radiotherapy || [http://forge.abcd.harvard.edu/gf/download/frsrelease/85/1828/popi-plan.tar.gz Plastimatch Dose Warping Data (MGH)] || [http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Plastimatch Tutorial] || Plastimatch, DVH extension (Csaba) || Data, Plastimatch Extension: DICOM/DICOM-RT Import, DICOM/DICOM-RT Export, B-Spine Deformable Registration,XFORMWARP Warping with transform Transforms,  
 
||7|| Radiotherapy || [http://forge.abcd.harvard.edu/gf/download/frsrelease/85/1828/popi-plan.tar.gz Plastimatch Dose Warping Data (MGH)] || [http://www.na-mic.org/Wiki/index.php/File:PlastimatchDose_TutorialContestSummer2012.pdf Plastimatch Tutorial] || Plastimatch, DVH extension (Csaba) || Data, Plastimatch Extension: DICOM/DICOM-RT Import, DICOM/DICOM-RT Export, B-Spine Deformable Registration,XFORMWARP Warping with transform Transforms,  
 
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||8|| White matter exploration for neurosurgical planning || [[media:WhiteMatterExplorationData.zip‎| White Matter Exploration dataset]]  || [[media:WhiteMatterExplorationNeurosurgicalPlanning_JHU2011_SoniaPujol.pdf‎ |Neurosurgical planning Tutorial]] || Diffusion ( Estimation, Tractography, Fiducial Seeding), Editor, Model Maker || Data, Volumes, Editor, Fiducials, Diffusion Tensor Estimation, Diffusion Tensor Scalar Measurements, Labelmap Seeding, Tractography Fiducial Seeding, Tractography Display
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||8|| White matter exploration for neurosurgical planning || [[media:WhiteMatterExplorationData.zip‎| White Matter Exploration dataset]]  || [http://www.slicer.org/slicerWiki/index.php/Documentation/4.1/Training#Slicer4_Neurosurgical_Planning_Tutorial Neurosurgical planning Tutorial]] || Diffusion ( Estimation, Tractography, Fiducial Seeding), Editor, Model Maker || Data, Volumes, Editor, Fiducials, Diffusion Tensor Estimation, Diffusion Tensor Scalar Measurements, Labelmap Seeding, Tractography Fiducial Seeding, Tractography Display
 
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||9|| Longitudinal analysis of meningioma growth||  Change Tracker Data are part of the tutorial || [http://www.slicer.org/slicerWiki/images/a/a1/Slicer3.6-ChangeTrackerTutorial.pdf Change Tracker Tutorial] || Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit || Change Tracker, Volume Rendering, BRAINSFit, CropVolume
 
||9|| Longitudinal analysis of meningioma growth||  Change Tracker Data are part of the tutorial || [http://www.slicer.org/slicerWiki/images/a/a1/Slicer3.6-ChangeTrackerTutorial.pdf Change Tracker Tutorial] || Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit || Change Tracker, Volume Rendering, BRAINSFit, CropVolume

Revision as of 05:44, 20 August 2012

Home < RSNA2012 Planning

Quantitative Imaging Reading Room

Tentative list of demonstrations for the RSNA 2012 Slicer booth. Needs further development and testing Note: RSNA demo machines will need nvidia graphics cards to get GPU Volume Rendering

Nb DEMO Datasets Notes Tools Slicer Modules
1 Data Loading and Visualization Slicer3Visualization Data Slicer3Visualization Tutorial] Compare View, Clipping, Save, Restore, Scene Views, Dicom studies sorting, Dicom networking (?) Data, Volumes, Models, Scene Views
2 MRI-based topographic parcellation of human brain EM Segmenter Data registration, segmentation EMSegmenter Tasks EM Segmenter EMSegmenter
3 Volume Rendering #1 Head Head CT Scan (Osirix Manix Dataset) show cropping, transfer functions, GPU, slice composite view, Annotations Volume Rendering and Annotations Volume Rendering, Annotations, Scene Views
4 Volume Rendering #2 Abdomen Abdominal CT scan with AAA (Osirix Panoramix Dataset) show cropping, transfer functions, GPU, slice composite view, Annotations Volume Rendering and Annotations Volume Rendering, Annotations, Scene Views
5 Volume Rendering #3 Thorax Thoracic CT scan show cropping, transfer functions, GPU, slice composite view, Annotations Volume Rendering and Annotations Volume Rendering, Annotations, Scene Views
6 Traumatic Brain Injury Case Analysis TBI Demo Data (UCLA) TBI tutorial ABC Segmentation, Model Maker, Editor, Annotations Data, ABC Segmentation, Model Maker, Editor, Annotations, Scene Views
7 Radiotherapy Plastimatch Dose Warping Data (MGH) Plastimatch Tutorial Plastimatch, DVH extension (Csaba) Data, Plastimatch Extension: DICOM/DICOM-RT Import, DICOM/DICOM-RT Export, B-Spine Deformable Registration,XFORMWARP Warping with transform Transforms,
8 White matter exploration for neurosurgical planning White Matter Exploration dataset Neurosurgical planning Tutorial] Diffusion ( Estimation, Tractography, Fiducial Seeding), Editor, Model Maker Data, Volumes, Editor, Fiducials, Diffusion Tensor Estimation, Diffusion Tensor Scalar Measurements, Labelmap Seeding, Tractography Fiducial Seeding, Tractography Display
9 Longitudinal analysis of meningioma growth Change Tracker Data are part of the tutorial Change Tracker Tutorial Change Tracker, Compare Views, Volume Rendering, CropVolume, Crosshairs, BRAINSFit Change Tracker, Volume Rendering, BRAINSFit, CropVolume
10 Image-guided prostate interventions Prostate Data updated for Slicer4, in progress Can load RSNA2010 demo scene, mostly working, see [1] Pre-op/Intra-op registration; Use Case Demo Prostate Data Linked Viewing Annotations, Models, Crosshairs, CompareViews
11 Brain Atlas NAC Multi-modality MRI-based Atlas of the Brain Work in progress - atlases are being updated Linked Viewing Data, Volumes, Models, Scene Views
12 Abdomen Atlas Knee Atlas Work in progress - atlases are being updated Linked Viewing Data, Volumes, Models, Scene Views
13 Knee Atlas Atlas Abdominal Atlas Work in progress - atlases are being updated Linked Viewing Data, Volumes, Models, Scene Views


List of Slicer Modules involved in RSNA tutorials & demos

  • Data
  • Welcome to Slicer
  • Volumes
  • Models
  • Scene Views
  • Annotations
  • Volume Rendering
  • Editor
  • Model Maker
  • Diffusion Tensor Estimation
  • Diffusion Tensor Scalar Measurements
  • Tractography Labelmap Seeding
  • Tractography Fiducial Seeding
  • Tractography Display
  • BRAINSTools
  • Change Tracker
  • CropVolume
  • Extensions:
    • ABC
    • Plastimatch
    • EMSegmenter
    • Skull Stripper


  • Documentation: We need all core modules reasonably well documented.